RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Plin1Q8CGN5 517 aa16.77■□□□□ 0.28
Pdlim5-208ENSMUST00000196220 Klhdc4Q921I2 584 aa16.77■□□□□ 0.28
Pdlim5-208ENSMUST00000196220 Armcx1Q9CX83 456 aa16.77■□□□□ 0.28
Pdlim5-208ENSMUST00000196220 Slc35g1Q8BY79 368 aa16.76■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Arfgef2A2A5R2 1792 aa16.76■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Mre11Q61216 706 aa16.76■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Nutm1Q8BHP2 1126 aa16.76■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Amotl1Q9D4H4 968 aa16.76■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Foxp4Q9DBY0 795 aaKnown RBP16.76■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Wnk3Q80XP9 1757 aa16.75■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Ppp1r9bQ6R891 817 aaKnown RBP16.75■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Msh6P54276 1358 aaKnown RBP16.74■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Phf23Q8BSN5 401 aa16.74■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Kif18aQ91WD7 886 aa16.74■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Nid2O88322 1403 aa16.74■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Myo5bP21271 1818 aa16.74■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Fmnl2A2APV2 1086 aa16.73■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Dnajc5P60904 198 aa16.73■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Kcna6Q61923 529 aa16.73■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 TatQ8QZR1 454 aa16.73■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Nup153E9Q3G8 1462 aaKnown RBP16.73■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Abcc12Q80WJ6 1366 aa16.73■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Ahnak2E9PYB0 1738 aaKnown RBP16.73■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Siglec1Q62230 1695 aa16.73■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Tm6sf1P58749 370 aa16.73■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Aldh8a1Q8BH00 487 aa16.73■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Rabep1O35551 862 aa16.71■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Mcm2P97310 904 aa16.71■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Ggnbp2Q5SV77 696 aa16.71■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Trim27Q62158 513 aa16.71■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 MlecQ6ZQI3 291 aaKnown RBP16.71■□□□□ 0.27
Pdlim5-208ENSMUST00000196220 Atf5O70191 283 aa16.7■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Prim1P20664 417 aa16.7■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Rangap1P46061 589 aaKnown RBP16.7■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Sv2bQ8BG39 683 aa16.7■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Slain2Q8CI08 581 aa16.7■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Gcc1Q9D4H2 778 aa16.7■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 ScaperF8VQ70 1398 aaKnown RBP16.7■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Hoxa7P02830 229 aa16.69■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Ecm2Q5FW85 670 aa16.69■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Gli3Q61602 1583 aa16.69■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Eif4g2Q62448 906 aaKnown RBP16.68■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Tmem132eQ6IEE6 982 aa16.68■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Eif2s2Q99L45 331 aaKnown RBP16.68■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 CarsQ9ER72 831 aaKnown RBP16.68■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 TnrQ8BYI9 1358 aa16.68■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Col18a1P39061 1774 aa16.67■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Sart3Q9JLI8 962 aaKnown RBP16.67■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 1700019A02RikA0A087WPV9 146 aa16.66■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Wdr63B2RY71 923 aa16.66■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Sptbn5F6UCX4 1208 aa16.66■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Q3TQI7 289 aaKnown RBP16.66■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Pnmal2G3X9N3 661 aa16.65■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Farp2Q91VS8 1065 aa16.65■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.65■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Dnajc10Q9DC23 793 aa16.65■□□□□ 0.26
Pdlim5-208ENSMUST00000196220 Cnksr1A2A9K7 700 aa16.64■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Fgd1P52734 960 aa16.64■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Aifm3Q3TY86 605 aa16.64■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Cog6Q8R3I3 657 aa16.64■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Simc1E9Q6E9 1354 aa16.63■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Fam13aQ8BGI4 693 aa16.63■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Snap23O09044 210 aa16.62■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Prkar2bP31324 416 aa16.62■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Ppp1r37Q8BKR5 712 aa16.62■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Senp3Q9EP97 568 aaKnown RBP16.62■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Pnpla7A2AJ88 1352 aa16.62■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Nol11Q8BJW5 723 aaKnown RBP16.62■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Amotl2Q8K371 772 aa16.62■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Triml2E9PW10 424 aa16.61■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Pibf1E9Q6K3 756 aa16.61■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Stk36Q69ZM6 1316 aa16.61■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Anapc15-psA0A140T8L6 141 aa16.6■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 TkfcQ8VC30 578 aa16.6■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Ccdc9Q8VC31 543 aaKnown RBP16.6■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Aox2Q5SGK3 1345 aa16.6■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 DccP70211 1447 aa16.6■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Mfap1aC0HKD8 439 aaKnown RBP16.59■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Mfap1bC0HKD9 439 aaKnown RBP16.59■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Gnai2P08752 355 aaKnown RBP16.59■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Dzip1Q8BMD2 852 aa16.59■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Rapgef3Q8VCC8 918 aa16.59■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Chpf2Q3UU43 768 aa16.59■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Atf3Q60765 181 aa16.59■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 CenppQ9CZ92 286 aa16.59■□□□□ 0.25
Pdlim5-208ENSMUST00000196220 Eif4a1P60843 406 aaKnown RBP16.58■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Fam83gQ5SWY7 812 aa16.58■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Atg3Q9CPX6 314 aa16.58■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Disp3A3KFU9 1347 aa16.57■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Evi5lH3BKQ3 813 aa16.57■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 CoilQ5SU73 570 aa16.57■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 BcorQ8CGN4 1759 aa16.56■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Gm10093D3YYI8 482 aa16.56■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Hdac1O09106 482 aaKnown RBP16.56■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Hsp90aa1P07901 733 aaKnown RBP16.56■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Tnpo1Q8BFY9 898 aaKnown RBP16.56■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Htatsf1Q8BGC0 757 aa16.56■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Bcl9lQ67FY2 1494 aa16.56■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Col1a2Q01149 1372 aa16.56■□□□□ 0.24
Pdlim5-208ENSMUST00000196220 Dixdc1Q80Y83 711 aa16.56■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms