RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 1700019A02RikA0A087WPV9 146 aa13.75□□□□□ -0.21
Lig3-212ENSMUST00000173727 Tmco5bQ80X59 307 aa13.75□□□□□ -0.21
Lig3-212ENSMUST00000173727 Abca15E9PWH4 1668 aa13.75□□□□□ -0.21
Lig3-212ENSMUST00000173727 Gm10471E9Q1C7 252 aa13.75□□□□□ -0.21
Lig3-212ENSMUST00000173727 Plekhm2Q80TQ5 1018 aa13.75□□□□□ -0.21
Lig3-212ENSMUST00000173727 OptnQ8K3K8 584 aa13.75□□□□□ -0.21
Lig3-212ENSMUST00000173727 Atp10bB1AWN4 1474 aa13.74□□□□□ -0.21
Lig3-212ENSMUST00000173727 HdgfP51859 237 aaKnown RBP13.74□□□□□ -0.21
Lig3-212ENSMUST00000173727 Prim1P20664 417 aa13.73□□□□□ -0.21
Lig3-212ENSMUST00000173727 Irx3P81067 507 aa13.73□□□□□ -0.21
Lig3-212ENSMUST00000173727 Bcl9lQ67FY2 1494 aa13.73□□□□□ -0.21
Lig3-212ENSMUST00000173727 Pibf1E9Q6K3 756 aa13.73□□□□□ -0.21
Lig3-212ENSMUST00000173727 CrklP47941 303 aa13.73□□□□□ -0.21
Lig3-212ENSMUST00000173727 Ppp1r37Q8BKR5 712 aa13.73□□□□□ -0.21
Lig3-212ENSMUST00000173727 Nectin2P32507 530 aa13.73□□□□□ -0.21
Lig3-212ENSMUST00000173727 KarsQ99MN1 595 aaKnown RBP13.73□□□□□ -0.21
Lig3-212ENSMUST00000173727 Nsd3Q6P2L6 1439 aa13.72□□□□□ -0.21
Lig3-212ENSMUST00000173727 Col15a1O35206 1367 aa13.72□□□□□ -0.21
Lig3-212ENSMUST00000173727 Znf521Q6KAS7 1311 aa13.72□□□□□ -0.21
Lig3-212ENSMUST00000173727 Ttll13A4Q9F6 804 aa13.72□□□□□ -0.21
Lig3-212ENSMUST00000173727 ZgpatQ8VDM1 511 aa13.72□□□□□ -0.21
Lig3-212ENSMUST00000173727 Simc1E9Q6E9 1354 aa13.72□□□□□ -0.21
Lig3-212ENSMUST00000173727 Znf330Q922H9 316 aa13.72□□□□□ -0.21
Lig3-212ENSMUST00000173727 AampJ3QN89 436 aa13.71□□□□□ -0.21
Lig3-212ENSMUST00000173727 Gimap5Q8BWF2 308 aa13.71□□□□□ -0.21
Lig3-212ENSMUST00000173727 Cavin2Q63918 418 aaKnown RBP13.7□□□□□ -0.22
Lig3-212ENSMUST00000173727 Zranb3Q6NZP1 1069 aa13.7□□□□□ -0.22
Lig3-212ENSMUST00000173727 Acsbg1Q99PU5 721 aa13.7□□□□□ -0.22
Lig3-212ENSMUST00000173727 Txnrd1Q9JMH6 613 aa13.7□□□□□ -0.22
Lig3-212ENSMUST00000173727 Kdm2bQ6P1G2 1309 aa13.7□□□□□ -0.22
Lig3-212ENSMUST00000173727 Nup153E9Q3G8 1462 aaKnown RBP13.7□□□□□ -0.22
Lig3-212ENSMUST00000173727 Ppp1r3fQ9JIG4 799 aa13.7□□□□□ -0.22
Lig3-212ENSMUST00000173727 Q3UPC7 1272 aa13.69□□□□□ -0.22
Lig3-212ENSMUST00000173727 Maco1Q7TQE6 664 aaKnown RBP13.69□□□□□ -0.22
Lig3-212ENSMUST00000173727 Aldh1l1Q8R0Y6 902 aa13.68□□□□□ -0.22
Lig3-212ENSMUST00000173727 Duxf3A0A0N4SV92 674 aa13.68□□□□□ -0.22
Lig3-212ENSMUST00000173727 Q3TQI7 289 aaKnown RBP13.67□□□□□ -0.22
Lig3-212ENSMUST00000173727 Abcc12Q80WJ6 1366 aa13.67□□□□□ -0.22
Lig3-212ENSMUST00000173727 RgmbQ7TQ33 436 aa13.67□□□□□ -0.22
Lig3-212ENSMUST00000173727 Nutm1Q8BHP2 1126 aa13.67□□□□□ -0.22
Lig3-212ENSMUST00000173727 Bcl11bQ99PV8 884 aa13.67□□□□□ -0.22
Lig3-212ENSMUST00000173727 Foxp4Q9DBY0 795 aaKnown RBP13.67□□□□□ -0.22
Lig3-212ENSMUST00000173727 Cdhr2E9Q7P9 1308 aa13.67□□□□□ -0.22
Lig3-212ENSMUST00000173727 Igsf1Q7TQA1 1317 aa13.67□□□□□ -0.22
Lig3-212ENSMUST00000173727 ThemisQ8BGW0 636 aa13.66□□□□□ -0.22
Lig3-212ENSMUST00000173727 Adgrb1Q3UHD1 1582 aa13.66□□□□□ -0.22
Lig3-212ENSMUST00000173727 Plekhd1B2RPU2 505 aa13.66□□□□□ -0.22
Lig3-212ENSMUST00000173727 Aox2Q5SGK3 1345 aa13.66□□□□□ -0.22
Lig3-212ENSMUST00000173727 Slit1Q80TR4 1531 aa13.66□□□□□ -0.22
Lig3-212ENSMUST00000173727 B4galnt3Q6L8S8 986 aa13.65□□□□□ -0.22
Lig3-212ENSMUST00000173727 Chl1P70232 1209 aa13.65□□□□□ -0.22
Lig3-212ENSMUST00000173727 FocadA2AKG8 1798 aa13.65□□□□□ -0.22
Lig3-212ENSMUST00000173727 Myo5bP21271 1818 aa13.65□□□□□ -0.22
Lig3-212ENSMUST00000173727 MarsQ68FL6 902 aaKnown RBP13.64□□□□□ -0.23
Lig3-212ENSMUST00000173727 Ric3Q8BPM6 367 aa13.64□□□□□ -0.23
Lig3-212ENSMUST00000173727 Zpr1Q62384 459 aa13.64□□□□□ -0.23
Lig3-212ENSMUST00000173727 Smim5Q8BT42 78 aa13.64□□□□□ -0.23
Lig3-212ENSMUST00000173727 Zfp142G5E869 1843 aa13.64□□□□□ -0.23
Lig3-212ENSMUST00000173727 Irx6Q9ER75 438 aa13.63□□□□□ -0.23
Lig3-212ENSMUST00000173727 Fam50bQ9WTJ8 334 aa13.63□□□□□ -0.23
Lig3-212ENSMUST00000173727 Marf1Q8BJ34 1730 aaKnown RBP13.63□□□□□ -0.23
Lig3-212ENSMUST00000173727 4930572O03RikQ8C5Y0 211 aa13.63□□□□□ -0.23
Lig3-212ENSMUST00000173727 Cc2d1aQ8K1A6 943 aa13.63□□□□□ -0.23
Lig3-212ENSMUST00000173727 Chmp7Q8R1T1 451 aa13.63□□□□□ -0.23
Lig3-212ENSMUST00000173727 Tnnt1O88346 262 aa13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 Slx1bQ8BX32 270 aa13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 MvpQ9EQK5 861 aa13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 CanxP35564 591 aaKnown RBP13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 Chpf2Q3UU43 768 aa13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 Btbd11Q6GQW0 1109 aa13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 Sv2bQ8BG39 683 aa13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 Smc5Q8CG46 1101 aaKnown RBP13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 Ccdc9Q8VC31 543 aaKnown RBP13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 Pdzd9Q9D9M4 266 aa13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 Chmp4bQ9D8B3 224 aaKnown RBP13.62□□□□□ -0.23
Lig3-212ENSMUST00000173727 Msh6P54276 1358 aaKnown RBP13.61□□□□□ -0.23
Lig3-212ENSMUST00000173727 Dbr1Q923B1 550 aa13.61□□□□□ -0.23
Lig3-212ENSMUST00000173727 Chmp5Q9D7S9 219 aa13.61□□□□□ -0.23
Lig3-212ENSMUST00000173727 Rlbp1Q9Z275 317 aa13.61□□□□□ -0.23
Lig3-212ENSMUST00000173727 Atf5O70191 283 aa13.6□□□□□ -0.23
Lig3-212ENSMUST00000173727 Phkg2Q9DB30 406 aa13.6□□□□□ -0.23
Lig3-212ENSMUST00000173727 Ankrd44B2RXR6 993 aa13.6□□□□□ -0.23
Lig3-212ENSMUST00000173727 Ddx54Q8K4L0 874 aaKnown RBP13.6□□□□□ -0.23
Lig3-212ENSMUST00000173727 Aplp1Q03157 653 aa13.6□□□□□ -0.23
Lig3-212ENSMUST00000173727 Ybx3Q9JKB3 361 aaKnown RBP13.6□□□□□ -0.23
Lig3-212ENSMUST00000173727 Tnks1bp1P58871 1720 aa13.6□□□□□ -0.23
Lig3-212ENSMUST00000173727 Aifm3Q3TY86 605 aa13.59□□□□□ -0.23
Lig3-212ENSMUST00000173727 Cyp2d12Q8BVD2 504 aa13.59□□□□□ -0.23
Lig3-212ENSMUST00000173727 Armcx1Q9CX83 456 aa13.59□□□□□ -0.23
Lig3-212ENSMUST00000173727 Eif4a1P60843 406 aaKnown RBP13.59□□□□□ -0.23
Lig3-212ENSMUST00000173727 Nkx2-3P97334 362 aa13.59□□□□□ -0.23
Lig3-212ENSMUST00000173727 Tom1O88746 492 aa13.59□□□□□ -0.23
Lig3-212ENSMUST00000173727 EspnQ9ET47 871 aa13.59□□□□□ -0.23
Lig3-212ENSMUST00000173727 Tns2Q8CGB6 1400 aa13.58□□□□□ -0.24
Lig3-212ENSMUST00000173727 Ccdc155Q80VJ8 648 aa13.58□□□□□ -0.24
Lig3-212ENSMUST00000173727 Dlg5E9Q9R9 1921 aa13.58□□□□□ -0.24
Lig3-212ENSMUST00000173727 Speer4bQ9D9F7 267 aa13.58□□□□□ -0.24
Lig3-212ENSMUST00000173727 Fam83gQ5SWY7 812 aa13.57□□□□□ -0.24
Lig3-212ENSMUST00000173727 Eif3bQ8JZQ9 803 aaKnown RBP13.57□□□□□ -0.24
Lig3-212ENSMUST00000173727 Cluap1Q8R3P7 413 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms