RNA–Protein interactions for RNA: ENSMUST00000161455.7

Ctc1-211, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Ctc1, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-211ENSMUST00000161455 Exoc5Q3TPX4 708 aa12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 Pm20d1Q8C165 503 aa12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 P2rx7Q9Z1M0 595 aa12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 Gm21663A0A0G2JE01 267 aa12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 Gm7361D3Z6R1 267 aa12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 5031410I06RikE9Q4E0 267 aa12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 Gm1979E9QAN3 267 aa12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 Gm5862K7N5V5 267 aa12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 Gm10220K7N660 267 aa12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 TmpoQ61033 693 aaKnown RBP12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 Trim28Q62318 834 aa12.92□□□□□ -0.34
Ctc1-211ENSMUST00000161455 Ddb1Q3U1J4 1140 aaKnown RBP12.9□□□□□ -0.34
Ctc1-211ENSMUST00000161455 Elp1Q7TT37 1333 aaKnown RBP12.9□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Pik3c2aQ61194 1686 aa12.89□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Cntnap1O54991 1385 aa12.89□□□□□ -0.35
Ctc1-211ENSMUST00000161455 DekQ7TNV0 380 aaKnown RBP12.89□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Gm6268A2A3U9 297 aa12.89□□□□□ -0.35
Ctc1-211ENSMUST00000161455 ApobrQ8VBT6 942 aa12.89□□□□□ -0.35
Ctc1-211ENSMUST00000161455 ThemisQ8BGW0 636 aa12.88□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Rab11fip3Q8CHD8 1047 aa12.88□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Mon2Q80TL7 1715 aa12.88□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Pard3Q99NH2 1333 aa12.87□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Dusp27Q148W8 1138 aa12.87□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Eif3bQ8JZQ9 803 aaKnown RBP12.87□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Cavin4A2AMM0 362 aa12.86□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Irf5P56477 497 aa12.86□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Ggnbp2Q5SV77 696 aa12.86□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Tex14Q7M6U3 1450 aa12.86□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Slc5a1Q8C3K6 665 aa12.86□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Swt1Q9DBQ9 907 aa12.86□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Fchsd2Q3USJ8 740 aa12.86□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Ccdc155Q80VJ8 648 aa12.86□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Snap23O09044 210 aa12.85□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Fam135bQ9DAI6 1403 aa12.85□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Col16a1Q8BLX7 1580 aa12.85□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Q3TQI7 289 aaKnown RBP12.85□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Dhx30Q99PU8 1217 aaKnown RBP12.85□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Wnk3Q80XP9 1757 aa12.84□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Rad17Q6NXW6 688 aa12.84□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Taok3Q8BYC6 898 aa12.84□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Ksr2Q3UVC0 959 aa12.84□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Slx1bQ8BX32 270 aa12.84□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Zfp142G5E869 1843 aa12.84□□□□□ -0.35
Ctc1-211ENSMUST00000161455 Sik1Q60670 779 aa12.83□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Fam43aQ8BUP8 424 aa12.83□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Ginm1Q91WR6 327 aa12.83□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Parp14Q2EMV9 1817 aa12.83□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Ankrd23Q812A3 306 aa12.83□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Chmp4bQ9D8B3 224 aaKnown RBP12.83□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Apbb1Q9QXJ1 710 aa12.83□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Bcl2l13P59017 434 aa12.82□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Bsdc1Q80Y55 427 aa12.82□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Camta1A2A891 1682 aa12.82□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Ccnl1Q52KE7 532 aaKnown RBP12.82□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Kdm6aO70546 1401 aa12.82□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Atxn3Q9CVD2 355 aa12.81□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Kiaa1107Q80TK0 1369 aa12.81□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Nom1Q3UFM5 854 aaKnown RBP12.81□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Amotl1Q9D4H4 968 aa12.81□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Kcnh8P59111 1102 aa12.8□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Pdlim2Q8R1G6 349 aa12.8□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Larp1Q6ZQ58 1072 aaKnown RBP12.8□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Col15a1O35206 1367 aa12.8□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Smg7Q5RJH6 1138 aaKnown RBP12.79□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Kiaa0319Q5SZV5 1081 aa12.79□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Fnbp4Q6ZQ03 1031 aa12.79□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Ppp1r37Q8BKR5 712 aa12.79□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Usp16Q99LG0 825 aa12.79□□□□□ -0.36
Ctc1-211ENSMUST00000161455 NudcO35685 332 aaKnown RBP12.79□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Map4k4P97820 1233 aaKnown RBP12.79□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Klc3Q91W40 508 aa12.78□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Bicdl1A0JNT9 577 aa12.78□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Atf7ipQ7TT18 1306 aa12.78□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Ralbp1Q62172 648 aa12.77□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Btbd11Q6GQW0 1109 aa12.77□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Ccdc30Q8BVF4 654 aa12.77□□□□□ -0.36
Ctc1-211ENSMUST00000161455 Tex2Q6ZPJ0 1128 aaKnown RBP12.77□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Tmco5bQ80X59 307 aa12.77□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Phkg2Q9DB30 406 aa12.77□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Klhdc4Q921I2 584 aa12.77□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Nfat5Q9WV30 1534 aa12.77□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Prim1P20664 417 aa12.76□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Pdzd9Q9D9M4 266 aa12.76□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Asic4Q7TNS7 539 aa12.76□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Ube2q2Q8K2Z8 378 aa12.76□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Uspl1Q3ULM6 1089 aa12.76□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Gnai1B2RSH2 354 aa12.75□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Fkbp4P30416 458 aa12.75□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Cnnm1Q0GA42 951 aa12.75□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Gnai3Q9DC51 354 aa12.75□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Rbm25B2RY56 838 aaKnown RBP12.75□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Slit2Q9R1B9 1521 aa12.75□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Map2P20357 1828 aa12.75□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Ppfibp2O35711 882 aa12.75□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Zfp444Q3TDV8 331 aaKnown RBP12.75□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Lrp6O88572 1613 aa12.74□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Simc1E9Q6E9 1354 aa12.74□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Nkx1-2P42580 305 aa12.74□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Paxip1Q6NZQ4 1056 aa12.74□□□□□ -0.37
Ctc1-211ENSMUST00000161455 Dnajc14Q921R4 703 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms