RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Hoxc9P09633 260 aa13.69□□□□□ -0.22
Ift88-201ENSMUST00000122063 Rfx1P48377 963 aa13.69□□□□□ -0.22
Ift88-201ENSMUST00000122063 Tbc1d9Q3UYK3 1264 aa13.69□□□□□ -0.22
Ift88-201ENSMUST00000122063 FanclQ9CR14 375 aa13.69□□□□□ -0.22
Ift88-201ENSMUST00000122063 D430041D05RikF6ZGR6 1678 aa13.69□□□□□ -0.22
Ift88-201ENSMUST00000122063 LifrP42703 1092 aa13.69□□□□□ -0.22
Ift88-201ENSMUST00000122063 Med1Q925J9 1575 aa13.68□□□□□ -0.22
Ift88-201ENSMUST00000122063 Tfip11Q9ERA6 838 aaKnown RBP13.68□□□□□ -0.22
Ift88-201ENSMUST00000122063 Chl1P70232 1209 aa13.68□□□□□ -0.22
Ift88-201ENSMUST00000122063 Ubr1O70481 1757 aa13.67□□□□□ -0.22
Ift88-201ENSMUST00000122063 Fam13aQ8BGI4 693 aa13.67□□□□□ -0.22
Ift88-201ENSMUST00000122063 HypkQ9CR41 129 aa13.67□□□□□ -0.22
Ift88-201ENSMUST00000122063 Fyb1O35601 819 aa13.67□□□□□ -0.22
Ift88-201ENSMUST00000122063 Amotl2Q8K371 772 aa13.67□□□□□ -0.22
Ift88-201ENSMUST00000122063 Kif2cQ922S8 721 aa13.67□□□□□ -0.22
Ift88-201ENSMUST00000122063 Camta1A2A891 1682 aa13.67□□□□□ -0.22
Ift88-201ENSMUST00000122063 Catsper2A2ARP9 588 aa13.66□□□□□ -0.22
Ift88-201ENSMUST00000122063 Zfp777B9EKF4 885 aa13.66□□□□□ -0.22
Ift88-201ENSMUST00000122063 Stk11ipQ3TAA7 1072 aa13.66□□□□□ -0.22
Ift88-201ENSMUST00000122063 TatQ8QZR1 454 aa13.66□□□□□ -0.22
Ift88-201ENSMUST00000122063 NalcnQ8BXR5 1738 aa13.66□□□□□ -0.22
Ift88-201ENSMUST00000122063 Col16a1Q8BLX7 1580 aa13.65□□□□□ -0.22
Ift88-201ENSMUST00000122063 Ccdc9Q8VC31 543 aaKnown RBP13.65□□□□□ -0.22
Ift88-201ENSMUST00000122063 Arap3Q8R5G7 1538 aa13.65□□□□□ -0.22
Ift88-201ENSMUST00000122063 C5P06684 1680 aa13.65□□□□□ -0.22
Ift88-201ENSMUST00000122063 Cgnl1Q6AW69 1298 aa13.65□□□□□ -0.23
Ift88-201ENSMUST00000122063 Chpf2Q3UU43 768 aa13.64□□□□□ -0.23
Ift88-201ENSMUST00000122063 Terf2O35144 541 aa13.62□□□□□ -0.23
Ift88-201ENSMUST00000122063 Aldh1l2Q8K009 923 aa13.62□□□□□ -0.23
Ift88-201ENSMUST00000122063 Als2Q920R0 1651 aa13.62□□□□□ -0.23
Ift88-201ENSMUST00000122063 Plcb2A3KGF7 1181 aa13.61□□□□□ -0.23
Ift88-201ENSMUST00000122063 Srgap3Q812A2 1099 aa13.61□□□□□ -0.23
Ift88-201ENSMUST00000122063 Tm6sf1P58749 370 aa13.61□□□□□ -0.23
Ift88-201ENSMUST00000122063 CalcaP70160 136 aa13.61□□□□□ -0.23
Ift88-201ENSMUST00000122063 Gcc1Q9D4H2 778 aa13.61□□□□□ -0.23
Ift88-201ENSMUST00000122063 Mon2Q80TL7 1715 aa13.61□□□□□ -0.23
Ift88-201ENSMUST00000122063 Bcl2l13P59017 434 aa13.6□□□□□ -0.23
Ift88-201ENSMUST00000122063 Nsfl1cQ9CZ44 370 aaKnown RBP13.6□□□□□ -0.23
Ift88-201ENSMUST00000122063 Q9D2X8 372 aa13.6□□□□□ -0.23
Ift88-201ENSMUST00000122063 C3P01027 1663 aa13.6□□□□□ -0.23
Ift88-201ENSMUST00000122063 Scn7aB1AYL1 1681 aa13.6□□□□□ -0.23
Ift88-201ENSMUST00000122063 Dnajc10Q9DC23 793 aa13.6□□□□□ -0.23
Ift88-201ENSMUST00000122063 Gnai2P08752 355 aaKnown RBP13.59□□□□□ -0.23
Ift88-201ENSMUST00000122063 Gsdma3Q5Y4Y6 464 aa13.59□□□□□ -0.23
Ift88-201ENSMUST00000122063 Aldh8a1Q8BH00 487 aa13.59□□□□□ -0.23
Ift88-201ENSMUST00000122063 Cyp46a1Q9WVK8 500 aa13.59□□□□□ -0.23
Ift88-201ENSMUST00000122063 Evi5lH3BKQ3 813 aa13.59□□□□□ -0.23
Ift88-201ENSMUST00000122063 Atg4a-psA0A0G2JFS9 396 aa13.58□□□□□ -0.23
Ift88-201ENSMUST00000122063 DekQ7TNV0 380 aaKnown RBP13.58□□□□□ -0.23
Ift88-201ENSMUST00000122063 Atg4aQ8C9S8 396 aa13.58□□□□□ -0.23
Ift88-201ENSMUST00000122063 Gm10093D3YYI8 482 aa13.58□□□□□ -0.24
Ift88-201ENSMUST00000122063 Pcdh10E9PXQ7 1057 aa13.58□□□□□ -0.24
Ift88-201ENSMUST00000122063 Hdac1O09106 482 aaKnown RBP13.58□□□□□ -0.24
Ift88-201ENSMUST00000122063 Cyp2d12Q8BVD2 504 aa13.58□□□□□ -0.24
Ift88-201ENSMUST00000122063 Vsig10D3YX43 558 aa13.58□□□□□ -0.24
Ift88-201ENSMUST00000122063 Fkbp4P30416 458 aa13.58□□□□□ -0.24
Ift88-201ENSMUST00000122063 Cwc27Q3TKY6 469 aa13.58□□□□□ -0.24
Ift88-201ENSMUST00000122063 Ppp1r42Q8R1Z4 357 aa13.58□□□□□ -0.24
Ift88-201ENSMUST00000122063 Bcar3Q9QZK2 820 aa13.58□□□□□ -0.24
Ift88-201ENSMUST00000122063 Tns3Q5SSZ5 1440 aa13.57□□□□□ -0.24
Ift88-201ENSMUST00000122063 PtprvP70289 1705 aa13.57□□□□□ -0.24
Ift88-201ENSMUST00000122063 Adgrb1Q3UHD1 1582 aa13.57□□□□□ -0.24
Ift88-201ENSMUST00000122063 Irx3P81067 507 aa13.57□□□□□ -0.24
Ift88-201ENSMUST00000122063 GnpatP98192 678 aa13.56□□□□□ -0.24
Ift88-201ENSMUST00000122063 Dmrtc1Q9D9R7 182 aa13.56□□□□□ -0.24
Ift88-201ENSMUST00000122063 Foxp4Q9DBY0 795 aaKnown RBP13.56□□□□□ -0.24
Ift88-201ENSMUST00000122063 Nphp1Q9QY53 687 aa13.56□□□□□ -0.24
Ift88-201ENSMUST00000122063 Slit2Q9R1B9 1521 aa13.56□□□□□ -0.24
Ift88-201ENSMUST00000122063 Hmox1P14901 289 aa13.56□□□□□ -0.24
Ift88-201ENSMUST00000122063 Ahnak2E9PYB0 1738 aaKnown RBP13.56□□□□□ -0.24
Ift88-201ENSMUST00000122063 Ptpn23Q6PB44 1692 aa13.56□□□□□ -0.24
Ift88-201ENSMUST00000122063 Gm10471E9Q1C7 252 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Mcm2P97310 904 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 CenppQ9CZ92 286 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 TimelessQ9R1X4 1197 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Exoc6bA6H5Z3 810 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Hsp90b1P08113 802 aaKnown RBP13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Chmp4cQ9D7F7 232 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Fmnl2A2APV2 1086 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Pdia3P27773 505 aaKnown RBP13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Ppip5k2Q6ZQB6 1129 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Gimap6Q8K349 305 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Disp3A3KFU9 1347 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Ncapd2Q8K2Z4 1392 aa13.55□□□□□ -0.24
Ift88-201ENSMUST00000122063 Map3k13Q1HKZ5 959 aa13.54□□□□□ -0.24
Ift88-201ENSMUST00000122063 Arhgef1Q61210 920 aaKnown RBP13.54□□□□□ -0.24
Ift88-201ENSMUST00000122063 Ssh1Q76I79 1042 aa13.54□□□□□ -0.24
Ift88-201ENSMUST00000122063 Ppp6r3Q922D4 844 aa13.54□□□□□ -0.24
Ift88-201ENSMUST00000122063 Slc4a10Q5DTL9 1118 aa13.54□□□□□ -0.24
Ift88-201ENSMUST00000122063 Tmem2Q5FWI3 1383 aa13.54□□□□□ -0.24
Ift88-201ENSMUST00000122063 Btbd11Q6GQW0 1109 aa13.53□□□□□ -0.24
Ift88-201ENSMUST00000122063 Igsf1Q7TQA1 1317 aa13.53□□□□□ -0.24
Ift88-201ENSMUST00000122063 Antxr1Q9CZ52 562 aa13.53□□□□□ -0.24
Ift88-201ENSMUST00000122063 Msh6P54276 1358 aaKnown RBP13.53□□□□□ -0.24
Ift88-201ENSMUST00000122063 Rsph3aQ3UFY4 516 aa13.53□□□□□ -0.24
Ift88-201ENSMUST00000122063 Ddx17Q501J6 650 aaKnown RBP13.53□□□□□ -0.24
Ift88-201ENSMUST00000122063 Phf23Q8BSN5 401 aa13.53□□□□□ -0.24
Ift88-201ENSMUST00000122063 Wdr17E9Q271 1322 aa13.53□□□□□ -0.24
Ift88-201ENSMUST00000122063 Prune1Q8BIW1 454 aa13.53□□□□□ -0.24
Ift88-201ENSMUST00000122063 Arfgef2A2A5R2 1792 aa13.52□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms