RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 Cep135Q6P5D4 1140 aa18.33■□□□□ 0.52
Shank1-203ENSMUST00000107938 Ppp6r1Q7TSI3 856 aa18.33■□□□□ 0.52
Shank1-203ENSMUST00000107938 Lmbr1Q9JIT0 490 aa18.33■□□□□ 0.52
Shank1-203ENSMUST00000107938 Tango6Q8C3S2 1079 aa18.33■□□□□ 0.52
Shank1-203ENSMUST00000107938 Nup88Q8CEC0 753 aaKnown RBP18.33■□□□□ 0.52
Shank1-203ENSMUST00000107938 NgefQ8CHT1 710 aa18.33■□□□□ 0.52
Shank1-203ENSMUST00000107938 Cep57l1Q8VDS7 400 aa18.32■□□□□ 0.52
Shank1-203ENSMUST00000107938 Gcc1Q9D4H2 778 aa18.32■□□□□ 0.52
Shank1-203ENSMUST00000107938 Ttll13A4Q9F6 804 aa18.32■□□□□ 0.52
Shank1-203ENSMUST00000107938 Luc7l2Q7TNC4 392 aaKnown RBP18.32■□□□□ 0.52
Shank1-203ENSMUST00000107938 Irx1P81068 480 aa18.32■□□□□ 0.52
Shank1-203ENSMUST00000107938 Sdad1Q80UZ2 687 aaKnown RBP18.31■□□□□ 0.52
Shank1-203ENSMUST00000107938 Rundc1Q0VDN7 615 aa18.31■□□□□ 0.52
Shank1-203ENSMUST00000107938 Gsdma3Q5Y4Y6 464 aa18.31■□□□□ 0.52
Shank1-203ENSMUST00000107938 Rbm33Q9CXK9 1231 aaKnown RBP18.31■□□□□ 0.52
Shank1-203ENSMUST00000107938 Zkscan5Q9Z1D8 819 aa18.31■□□□□ 0.52
Shank1-203ENSMUST00000107938 Cux1P53564 1515 aa18.31■□□□□ 0.52
Shank1-203ENSMUST00000107938 Mtus1Q5HZI1 1210 aa18.31■□□□□ 0.52
Shank1-203ENSMUST00000107938 Dync1i2O88487 612 aaKnown RBP18.31■□□□□ 0.52
Shank1-203ENSMUST00000107938 Golga1Q9CW79 758 aa18.31■□□□□ 0.52
Shank1-203ENSMUST00000107938 Cep162Q6ZQ06 1403 aa18.3■□□□□ 0.52
Shank1-203ENSMUST00000107938 Ccdc121E9Q6D3 323 aa18.3■□□□□ 0.52
Shank1-203ENSMUST00000107938 Dnajc21E9Q8D0 531 aa18.3■□□□□ 0.52
Shank1-203ENSMUST00000107938 NexnQ7TPW1 607 aa18.3■□□□□ 0.52
Shank1-203ENSMUST00000107938 Calml4Q91WQ9 153 aa18.3■□□□□ 0.52
Shank1-203ENSMUST00000107938 GmnnO88513 206 aa18.3■□□□□ 0.52
Shank1-203ENSMUST00000107938 Q9D2X8 372 aa18.3■□□□□ 0.52
Shank1-203ENSMUST00000107938 Gm21680A0A0G2JGR8 267 aa18.3■□□□□ 0.52
Shank1-203ENSMUST00000107938 Brms1Q99N20 246 aa18.3■□□□□ 0.52
Shank1-203ENSMUST00000107938 Krt8P11679 490 aaKnown RBP18.3■□□□□ 0.52
Shank1-203ENSMUST00000107938 Frmd3Q8BHD4 595 aa18.29■□□□□ 0.52
Shank1-203ENSMUST00000107938 Syce3B5KM66 88 aa18.29■□□□□ 0.52
Shank1-203ENSMUST00000107938 Pabpn1lQ5XFR0 273 aa18.29■□□□□ 0.52
Shank1-203ENSMUST00000107938 Taok3Q8BYC6 898 aa18.29■□□□□ 0.52
Shank1-203ENSMUST00000107938 UacaQ8CGB3 1411 aa18.29■□□□□ 0.52
Shank1-203ENSMUST00000107938 Stx1aO35526 288 aa18.29■□□□□ 0.52
Shank1-203ENSMUST00000107938 Taf7lQ9D3R9 471 aa18.28■□□□□ 0.52
Shank1-203ENSMUST00000107938 Cep128Q8BI22 1102 aa18.28■□□□□ 0.52
Shank1-203ENSMUST00000107938 Mphosph6Q9D1Q1 161 aa18.28■□□□□ 0.52
Shank1-203ENSMUST00000107938 Plekhh2Q8C115 1491 aa18.28■□□□□ 0.52
Shank1-203ENSMUST00000107938 Ccdc148Q6P5U8 527 aa18.28■□□□□ 0.52
Shank1-203ENSMUST00000107938 Cplx4Q80WM3 160 aa18.28■□□□□ 0.52
Shank1-203ENSMUST00000107938 Tbc1d31Q6NXY1 996 aa18.28■□□□□ 0.52
Shank1-203ENSMUST00000107938 Tuft1O08970 390 aa18.27■□□□□ 0.52
Shank1-203ENSMUST00000107938 Abcc8B2RUS7 1588 aa18.27■□□□□ 0.52
Shank1-203ENSMUST00000107938 CrbnQ8C7D2 445 aa18.27■□□□□ 0.52
Shank1-203ENSMUST00000107938 Tubb2aQ7TMM9 445 aa18.27■□□□□ 0.52
Shank1-203ENSMUST00000107938 Tubb2bQ9CWF2 445 aa18.27■□□□□ 0.52
Shank1-203ENSMUST00000107938 Hip1rQ9JKY5 1068 aa18.27■□□□□ 0.51
Shank1-203ENSMUST00000107938 Taf7Q9R1C0 341 aa18.27■□□□□ 0.51
Shank1-203ENSMUST00000107938 Nek5Q7TSC3 627 aa18.27■□□□□ 0.51
Shank1-203ENSMUST00000107938 Ccdc178Q8CDV0 866 aa18.27■□□□□ 0.51
Shank1-203ENSMUST00000107938 Krt7Q9DCV7 457 aa18.27■□□□□ 0.51
Shank1-203ENSMUST00000107938 Ca8P28651 291 aa18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Ccp110Q7TSH4 1004 aa18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Ppp1r1bQ60829 194 aa18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Brd3Q8K2F0 726 aaKnown RBP18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Mcm4P49717 862 aa18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Psmd6Q99JI4 389 aa18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Cyp26c1B2RXA7 518 aa18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Ddx19aQ61655 478 aaKnown RBP18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Nuf2Q99P69 463 aa18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Lrrfip2Q91WK0 415 aa18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Usp48Q3V0C5 1052 aa18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Ccdc25Q78PG9 208 aa18.26■□□□□ 0.51
Shank1-203ENSMUST00000107938 Cavin2Q63918 418 aaKnown RBP18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Grpel1Q99LP6 217 aa18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 IqcdQ9D3V1 458 aa18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Gm35339A0A140LHH9 1649 aa18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Me1P06801 572 aa18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Soga3Q6NZL0 945 aa18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Bcap29Q61334 240 aa18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Tnpo1Q8BFY9 898 aaKnown RBP18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Filip1Q9CS72 1211 aa18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Washc2Q6PGL7 1334 aa18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Slc38a10Q5I012 1090 aa18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Trim17Q7TPM3 477 aa18.25■□□□□ 0.51
Shank1-203ENSMUST00000107938 Spats2lQ91WJ7 558 aaKnown RBP18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Agbl1Q09M05 972 aa18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Cfap157Q0VFX2 523 aa18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Maco1Q7TQE6 664 aaKnown RBP18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Q9D9S1 216 aa18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Fam76aQ922G2 307 aa18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Trpc3Q9QZC1 836 aa18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Sept8Q8CHH9 429 aa18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Unc13aQ4KUS2 1712 aa18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 KarsQ99MN1 595 aaKnown RBP18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Apol7bB1AQP7 369 aa18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Zkscan2G3X952 960 aa18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Top1Q04750 767 aaKnown RBP18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Znf330Q922H9 316 aa18.24■□□□□ 0.51
Shank1-203ENSMUST00000107938 Dhx29Q6PGC1 1365 aaKnown RBP18.23■□□□□ 0.51
Shank1-203ENSMUST00000107938 Cib2Q9Z309 187 aa18.23■□□□□ 0.51
Shank1-203ENSMUST00000107938 Slc4a10Q5DTL9 1118 aa18.23■□□□□ 0.51
Shank1-203ENSMUST00000107938 Clcn1Q64347 994 aa18.23■□□□□ 0.51
Shank1-203ENSMUST00000107938 Mctp1E9PV86 951 aa18.23■□□□□ 0.51
Shank1-203ENSMUST00000107938 SkiQ60698 725 aa18.23■□□□□ 0.51
Shank1-203ENSMUST00000107938 Wasf1Q8R5H6 559 aa18.23■□□□□ 0.51
Shank1-203ENSMUST00000107938 Nap1l5Q9JJF0 156 aa18.23■□□□□ 0.51
Shank1-203ENSMUST00000107938 Vps41Q5KU39 853 aa18.23■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms