RNA–Protein interactions for RNA: ENSMUST00000063249.8

Xrcc1-201, Transcript of DNA repair protein XRCC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Xrcc1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1-201ENSMUST00000063249 Col22a1E9Q7P1 1613 aa19.38■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 GakQ99KY4 1305 aa19.38■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Ppp6r1Q7TSI3 856 aa19.38■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Usp19Q3UJD6 1360 aa19.37■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Aox2Q5SGK3 1345 aa19.37■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Larp1Q6ZQ58 1072 aaKnown RBP19.37■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Eif3bQ8JZQ9 803 aaKnown RBP19.37■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Phkg2Q9DB30 406 aa19.37■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Kiaa0319Q5SZV5 1081 aa19.36■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Pdzd9Q9D9M4 266 aa19.35■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Uspl1Q3ULM6 1089 aa19.34■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Rgs17Q9QZB0 210 aa19.34■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 PappaQ8R4K8 1624 aa19.34■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Cavin4A2AMM0 362 aa19.33■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Ssfa2Q922B9 1252 aa19.33■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Zcrb1Q9CZ96 217 aaKnown RBP19.33■□□□□ 0.69
Xrcc1-201ENSMUST00000063249 Ubap1lG3UW59 384 aa19.32■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Asic4Q7TNS7 539 aa19.32■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Gm21663A0A0G2JE01 267 aa19.31■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Gm7361D3Z6R1 267 aa19.31■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 5031410I06RikE9Q4E0 267 aa19.31■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Gm1979E9QAN3 267 aa19.31■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Gm5862K7N5V5 267 aa19.31■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Gm10220K7N660 267 aa19.31■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Mak16Q8BGS0 296 aaKnown RBP19.31■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Uhrf1bp1B2KF50 1429 aa19.31■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Slc5a1Q8C3K6 665 aa19.3■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Lrit1Q8K099 624 aa19.3■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Chmp7Q8R1T1 451 aa19.3■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Snap23O09044 210 aa19.3■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Ppfibp2O35711 882 aa19.29■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Ciz1Q8VEH2 845 aa19.29■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Bsdc1Q80Y55 427 aa19.29■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Pnpla7A2AJ88 1352 aa19.29■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Abcc12Q80WJ6 1366 aa19.28■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Dusp27Q148W8 1138 aa19.28■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 ApobrQ8VBT6 942 aa19.28■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Swt1Q9DBQ9 907 aa19.28■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Rtf1A2AQ19 715 aaKnown RBP19.27■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Stra8P70278 393 aa19.27■□□□□ 0.68
Xrcc1-201ENSMUST00000063249 Ccdc6D3YZP9 469 aa19.26■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Nkx2-3P97334 362 aa19.26■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 GalcP54818 684 aa19.26■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Ncbp3Q8BZR9 615 aaKnown RBP19.26■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Nsd3Q6P2L6 1439 aa19.25■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Sos1Q62245 1319 aa19.25■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Ccnl1Q52KE7 532 aaKnown RBP19.25■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Crb1Q8VHS2 1405 aa19.25■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 CrbnQ8C7D2 445 aa19.25■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Afg3l2Q8JZQ2 802 aaKnown RBP19.25■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Adamtsl1Q8BLI0 1745 aa19.24■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Ints5Q8CHT3 1018 aa19.23■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Arhgap33Q80YF9 1305 aa19.23■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Tjp1P39447 1745 aaKnown RBP19.23■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Ubr2Q6WKZ8 1755 aa19.23■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Shank3Q4ACU6 1730 aa19.22■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Abca3Q8R420 1704 aa19.22■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Rps6ka4Q9Z2B9 773 aa19.22■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Myo5bP21271 1818 aa19.21■□□□□ 0.67
Xrcc1-201ENSMUST00000063249 Ccdc155Q80VJ8 648 aa19.2■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Sos2Q02384 1333 aa19.2■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Speer4f1Q9D5Q6 258 aa19.19■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Vars2Q3U2A8 1060 aa19.18■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Hdac6Q9Z2V5 1149 aa19.17■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Erbb3Q61526 1339 aa19.17■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Ralbp1Q62172 648 aa19.17■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Prim1P20664 417 aa19.16■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Rad21Q61550 635 aaKnown RBP19.16■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Klc3Q91W40 508 aa19.16■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Ggnbp2Q5SV77 696 aa19.16■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Atxn3Q9CVD2 355 aa19.16■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Neurod2Q62414 383 aa19.15■□□□□ 0.66
Xrcc1-201ENSMUST00000063249 Btbd11Q6GQW0 1109 aa19.14■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Kiaa0319lQ8K135 1048 aa19.14■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Snapc4Q8BP86 1333 aa19.13■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Atg3Q9CPX6 314 aa19.13■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 AceP09470 1312 aa19.12■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Apba2P98084 750 aa19.12■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Efcab2Q9CQ46 164 aa19.11■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Gnai1B2RSH2 354 aa19.1■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Zfp444Q3TDV8 331 aaKnown RBP19.1■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Klhdc4Q921I2 584 aa19.1■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Gnai3Q9DC51 354 aa19.1■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Jmjd4Q8BFT6 427 aa19.1■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Cap2Q9CYT6 476 aa19.1■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Pim2Q62070 370 aa19.09■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Nop58Q6DFW4 536 aaKnown RBP19.09■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Cdc37l1Q9CZP7 335 aa19.09■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Tiam2Q6ZPF3 1715 aa19.09■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Ccdc30Q8BVF4 654 aa19.08■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Foxp4Q9DBY0 795 aaKnown RBP19.08■□□□□ 0.65
Xrcc1-201ENSMUST00000063249 Dcaf5Q80T85 946 aa19.08■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Q8BT18 775 aa19.08■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Ttc21aQ8C0S4 1314 aa19.07■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Smg7Q5RJH6 1138 aaKnown RBP19.07■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Ankrd50F7BE84 1390 aa19.07■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 U2surpQ6NV83 1029 aaKnown RBP19.06■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Senp3Q9EP97 568 aaKnown RBP19.06■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Ankrd13dQ6PD24 605 aa19.06■□□□□ 0.64
Xrcc1-201ENSMUST00000063249 Ofd1Q80Z25 1017 aa19.06■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms