RNA–Protein interactions for RNA: ENSMUST00000063249.8

Xrcc1-201, Transcript of DNA repair protein XRCC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Xrcc1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1-201ENSMUST00000063249 Gm35339A0A140LHH9 1649 aa32.67■■■□□ 2.82
Xrcc1-201ENSMUST00000063249 NischQ80TM9 1593 aa32.36■■■□□ 2.77
Xrcc1-201ENSMUST00000063249 Abcc9P70170 1546 aa31.37■■■□□ 2.61
Xrcc1-201ENSMUST00000063249 Abcc8B2RUS7 1588 aa31.21■■■□□ 2.59
Xrcc1-201ENSMUST00000063249 ScribQ80U72 1612 aa29.9■■■□□ 2.38
Xrcc1-201ENSMUST00000063249 NacadQ5SWP3 1504 aa29■■■□□ 2.23
Xrcc1-201ENSMUST00000063249 Kdm5dQ62240 1548 aa28.99■■■□□ 2.23
Xrcc1-201ENSMUST00000063249 Dcaf1Q80TR8 1506 aa28.83■■■□□ 2.21
Xrcc1-201ENSMUST00000063249 Sycp2Q9CUU3 1500 aa28.42■■■□□ 2.14
Xrcc1-201ENSMUST00000063249 Rb1cc1Q9ESK9 1588 aa28.23■■■□□ 2.11
Xrcc1-201ENSMUST00000063249 Rhox8Q6VSS7 320 aa28.23■■■□□ 2.11
Xrcc1-201ENSMUST00000063249 BicraF8VPZ9 1578 aa27.97■■■□□ 2.07
Xrcc1-201ENSMUST00000063249 Ccdc180J3QNE4 1664 aa27.89■■■□□ 2.06
Xrcc1-201ENSMUST00000063249 Baz1aO88379 1555 aa27.87■■■□□ 2.05
Xrcc1-201ENSMUST00000063249 Crybg2B7ZCC2 1516 aa27.72■■■□□ 2.03
Xrcc1-201ENSMUST00000063249 Zcchc6Q5BLK4 1491 aaKnown RBP27.38■■□□□ 1.97
Xrcc1-201ENSMUST00000063249 Pds5bQ4VA53 1446 aaKnown RBP27.12■■□□□ 1.93
Xrcc1-201ENSMUST00000063249 Smarca2Q6DIC0 1577 aa27.09■■□□□ 1.93
Xrcc1-201ENSMUST00000063249 Atad2bE9Q166 1460 aaKnown RBP26.93■■□□□ 1.9
Xrcc1-201ENSMUST00000063249 Rtl1Q7M732 1744 aa26.89■■□□□ 1.89
Xrcc1-201ENSMUST00000063249 Cecr2E9Q2Z1 1453 aa26.86■■□□□ 1.89
Xrcc1-201ENSMUST00000063249 Smarca4Q3TKT4 1613 aaKnown RBP26.83■■□□□ 1.89
Xrcc1-201ENSMUST00000063249 Thoc2B1AZI6 1594 aaKnown RBP26.77■■□□□ 1.88
Xrcc1-201ENSMUST00000063249 Dnajc5bQ9CQ94 199 aa26.68■■□□□ 1.86
Xrcc1-201ENSMUST00000063249 Iqgap2Q3UQ44 1575 aa26.65■■□□□ 1.86
Xrcc1-201ENSMUST00000063249 Ercc6F8VPZ5 1481 aa26.55■■□□□ 1.84
Xrcc1-201ENSMUST00000063249 Wdr62Q3U3T8 1523 aa26.37■■□□□ 1.81
Xrcc1-201ENSMUST00000063249 Ccdc136Q3TVA9 1136 aa26.37■■□□□ 1.81
Xrcc1-201ENSMUST00000063249 Cc2d2aQ8CFW7 1633 aa26.34■■□□□ 1.81
Xrcc1-201ENSMUST00000063249 Brd4Q9ESU6 1400 aaKnown RBP26.34■■□□□ 1.81
Xrcc1-201ENSMUST00000063249 Frmpd1A2AKB4 1549 aa26.33■■□□□ 1.81
Xrcc1-201ENSMUST00000063249 CftrP26361 1476 aa26.32■■□□□ 1.8
Xrcc1-201ENSMUST00000063249 Synj1Q8CHC4 1574 aa26.29■■□□□ 1.8
Xrcc1-201ENSMUST00000063249 Cttnbp2B9EJA2 1648 aa26.27■■□□□ 1.8
Xrcc1-201ENSMUST00000063249 Fam135aQ6NS59 1506 aa26.24■■□□□ 1.79
Xrcc1-201ENSMUST00000063249 Phldb1Q6PDH0 1371 aaKnown RBP26.1■■□□□ 1.77
Xrcc1-201ENSMUST00000063249 Trim41Q5NCC3 630 aa26■■□□□ 1.75
Xrcc1-201ENSMUST00000063249 Unc13aQ4KUS2 1712 aa25.96■■□□□ 1.75
Xrcc1-201ENSMUST00000063249 Baz1bQ9Z277 1479 aa25.94■■□□□ 1.74
Xrcc1-201ENSMUST00000063249 Ubl4bQ9CQ84 188 aa25.82■■□□□ 1.72
Xrcc1-201ENSMUST00000063249 Esf1Q3V1V3 845 aaKnown RBP25.82■■□□□ 1.72
Xrcc1-201ENSMUST00000063249 Mrc2Q64449 1479 aa25.61■■□□□ 1.69
Xrcc1-201ENSMUST00000063249 Rsf1E9PWW9 1441 aaKnown RBP25.56■■□□□ 1.68
Xrcc1-201ENSMUST00000063249 Golga3P55937 1487 aa25.53■■□□□ 1.68
Xrcc1-201ENSMUST00000063249 Kif15Q6P9L6 1387 aa25.49■■□□□ 1.67
Xrcc1-201ENSMUST00000063249 Lamc3Q9R0B6 1581 aa25.48■■□□□ 1.67
Xrcc1-201ENSMUST00000063249 Top2bQ64511 1612 aa25.47■■□□□ 1.67
Xrcc1-201ENSMUST00000063249 Cux2P70298 1426 aa25.4■■□□□ 1.66
Xrcc1-201ENSMUST00000063249 Cngb1E1AZ71 1325 aa25.37■■□□□ 1.65
Xrcc1-201ENSMUST00000063249 TnnQ80Z71 1560 aa25.3■■□□□ 1.64
Xrcc1-201ENSMUST00000063249 Fmn1Q05860 1466 aa25.18■■□□□ 1.62
Xrcc1-201ENSMUST00000063249 Kif21aQ9QXL2 1672 aa25.13■■□□□ 1.61
Xrcc1-201ENSMUST00000063249 Npm1Q61937 292 aaKnown RBP25.12■■□□□ 1.61
Xrcc1-201ENSMUST00000063249 Cep164Q5DU05 1446 aa25.09■■□□□ 1.61
Xrcc1-201ENSMUST00000063249 Ccdc18Q640L5 1455 aa25.08■■□□□ 1.61
Xrcc1-201ENSMUST00000063249 Camsap1A2AHC3 1581 aa25.06■■□□□ 1.6
Xrcc1-201ENSMUST00000063249 Lrriq1Q0P5X1 1673 aa25.02■■□□□ 1.6
Xrcc1-201ENSMUST00000063249 Il27Q8K3I6 234 aa24.97■■□□□ 1.59
Xrcc1-201ENSMUST00000063249 Ccdc88bQ4QRL3 1481 aa24.93■■□□□ 1.58
Xrcc1-201ENSMUST00000063249 LrpprcQ6PB66 1392 aaKnown RBP24.91■■□□□ 1.58
Xrcc1-201ENSMUST00000063249 Dhx29Q6PGC1 1365 aaKnown RBP24.9■■□□□ 1.58
Xrcc1-201ENSMUST00000063249 PogzQ8BZH4 1409 aaKnown RBP24.8■■□□□ 1.56
Xrcc1-201ENSMUST00000063249 Crocc2F6XLV1 1638 aa24.77■■□□□ 1.56
Xrcc1-201ENSMUST00000063249 Urb2E9Q7L1 1524 aaKnown RBP24.77■■□□□ 1.56
Xrcc1-201ENSMUST00000063249 Top2aQ01320 1528 aaKnown RBP24.77■■□□□ 1.56
Xrcc1-201ENSMUST00000063249 Chic1Q8CBW7 227 aa24.76■■□□□ 1.55
Xrcc1-201ENSMUST00000063249 Grin2bQ01097 1482 aa24.75■■□□□ 1.55
Xrcc1-201ENSMUST00000063249 Plb1Q3TTY0 1478 aa24.74■■□□□ 1.55
Xrcc1-201ENSMUST00000063249 Eif4g3Q80XI3 1579 aaKnown RBP24.69■■□□□ 1.54
Xrcc1-201ENSMUST00000063249 Duox2A2AQ99 1517 aa24.68■■□□□ 1.54
Xrcc1-201ENSMUST00000063249 HrcG5E8J6 738 aa24.6■■□□□ 1.53
Xrcc1-201ENSMUST00000063249 Efcab5A0JP43 1406 aa24.56■■□□□ 1.52
Xrcc1-201ENSMUST00000063249 NrkQ9R0G8 1455 aa24.56■■□□□ 1.52
Xrcc1-201ENSMUST00000063249 Ift140E9PY46 1464 aa24.56■■□□□ 1.52
Xrcc1-201ENSMUST00000063249 Samd9lQ69Z37 1561 aa24.5■■□□□ 1.51
Xrcc1-201ENSMUST00000063249 Shroom4Q1W617 1475 aa24.45■■□□□ 1.51
Xrcc1-201ENSMUST00000063249 PtprkP35822 1457 aa24.44■■□□□ 1.5
Xrcc1-201ENSMUST00000063249 Disp1Q3TDN0 1521 aa24.44■■□□□ 1.5
Xrcc1-201ENSMUST00000063249 Rusc2Q80U22 1514 aa24.4■■□□□ 1.5
Xrcc1-201ENSMUST00000063249 Pbrm1Q8BSQ9 1634 aaKnown RBP24.34■■□□□ 1.49
Xrcc1-201ENSMUST00000063249 Nup160Q9Z0W3 1402 aaKnown RBP24.33■■□□□ 1.48
Xrcc1-201ENSMUST00000063249 Rad54l2Q99NG0 1466 aa24.32■■□□□ 1.48
Xrcc1-201ENSMUST00000063249 Magi3Q9EQJ9 1476 aa24.26■■□□□ 1.47
Xrcc1-201ENSMUST00000063249 Cc2d2bA0A286YDU8 1405 aa24.26■■□□□ 1.47
Xrcc1-201ENSMUST00000063249 Setd1bQ8CFT2 1985 aa24.25■■□□□ 1.47
Xrcc1-201ENSMUST00000063249 Grin2aP35436 1464 aa24.24■■□□□ 1.47
Xrcc1-201ENSMUST00000063249 SynmQ70IV5 1561 aa24.23■■□□□ 1.47
Xrcc1-201ENSMUST00000063249 Shroom2A2ALU4 1481 aa24.19■■□□□ 1.46
Xrcc1-201ENSMUST00000063249 Npm2Q80W85 207 aa24.18■■□□□ 1.46
Xrcc1-201ENSMUST00000063249 Gab3Q8BSM5 595 aa24.18■■□□□ 1.46
Xrcc1-201ENSMUST00000063249 Gpatch8A2A6A1 1505 aa24.16■■□□□ 1.46
Xrcc1-201ENSMUST00000063249 Pla2r1Q62028 1487 aa24.16■■□□□ 1.46
Xrcc1-201ENSMUST00000063249 Rapgef2Q8CHG7 1496 aa24.15■■□□□ 1.46
Xrcc1-201ENSMUST00000063249 Mroh2bQ7M6Y6 1581 aa24.14■■□□□ 1.46
Xrcc1-201ENSMUST00000063249 Zeb1Q64318 1117 aa24.13■■□□□ 1.45
Xrcc1-201ENSMUST00000063249 AqrQ8CFQ3 1481 aaKnown RBP24.12■■□□□ 1.45
Xrcc1-201ENSMUST00000063249 Arhgap35Q91YM2 1499 aa24.04■■□□□ 1.44
Xrcc1-201ENSMUST00000063249 Map3k1P53349 1493 aa24.02■■□□□ 1.44
Xrcc1-201ENSMUST00000063249 Eif4g1Q6NZJ6 1600 aaKnown RBP24■■□□□ 1.43
Xrcc1-201ENSMUST00000063249 Cep162Q6ZQ06 1403 aa23.98■■□□□ 1.43
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms