RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Trim27Q62158 513 aa10.09□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Ccdc94Q9D6J3 314 aa10.09□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Nsd3Q6P2L6 1439 aa10.09□□□□□ -0.79
Cdc40-201ENSMUST00000044166 Irx2P81066 474 aa10.08□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Igf1rQ60751 1373 aa10.08□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Cdc42bpgQ80UW5 1551 aa10.08□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Vamp4O70480 141 aa10.08□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Tnnt1O88346 262 aa10.08□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Aldh8a1Q8BH00 487 aa10.08□□□□□ -0.8
Cdc40-201ENSMUST00000044166 EngaseQ8BX80 734 aa10.08□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Cdc37l1Q9CZP7 335 aa10.08□□□□□ -0.8
Cdc40-201ENSMUST00000044166 4931400O07RikQ9D4M5 137 aa10.08□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Cfap65Q3V0B4 1847 aa10.08□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Prex1Q69ZK0 1650 aa10.07□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Gcc1Q9D4H2 778 aa10.07□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Mcm2P97310 904 aa10.07□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Zbtb38Q3LR78 1197 aa10.07□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Slc12a5Q91V14 1138 aa10.07□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Gnai1B2RSH2 354 aa10.06□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Stk26Q99JT2 416 aa10.06□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Gnai3Q9DC51 354 aa10.06□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Ca8P28651 291 aa10.06□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Mknk2Q8CDB0 459 aa10.06□□□□□ -0.8
Cdc40-201ENSMUST00000044166 PalmQ9Z0P4 383 aa10.06□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Atp7bQ64446 1462 aa10.06□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Ift172Q6VH22 1749 aa10.05□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Stk11ipQ3TAA7 1072 aa10.05□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Zranb1Q7M760 708 aa10.05□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Depdc5P61460 1591 aa10.05□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Irf6P97431 467 aa10.05□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Tecpr2Q3UH45 1423 aa10.05□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Nucb1Q02819 459 aaKnown RBP10.04□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Trerf1Q8BXJ2 1205 aa10.04□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Ppp6r3Q922D4 844 aa10.04□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Chd1P40201 1711 aa10.04□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Gsto1O09131 240 aa10.04□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Elp1Q7TT37 1333 aaKnown RBP10.04□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Gtpbp4Q99ME9 634 aaKnown RBP10.04□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Glipr1l2Q9CQ35 332 aa10.04□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Ccdc96Q9CR92 584 aa10.04□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Pdia3P27773 505 aaKnown RBP10.03□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Cavin2Q63918 418 aaKnown RBP10.03□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Cyp27a1Q9DBG1 533 aa10.03□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Atp2b3Q0VF55 1220 aa10.03□□□□□ -0.8
Cdc40-201ENSMUST00000044166 NinlQ6ZQ12 1394 aa10.03□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Topbp1Q6ZQF0 1515 aa10.03□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Gm9992B2RWK3 458 aa10.03□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Unc93aQ710D3 458 aa10.03□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Atp1b4Q99ME6 356 aa10.03□□□□□ -0.8
Cdc40-201ENSMUST00000044166 FanclQ9CR14 375 aa10.03□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Ric3Q8BPM6 367 aa10.02□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Sugp2Q8CH09 1067 aa10.02□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Rab11fip3Q8CHD8 1047 aa10.02□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Ssr1Q9CY50 286 aaKnown RBP10.02□□□□□ -0.8
Cdc40-201ENSMUST00000044166 Gzf1Q4VBD9 706 aa10.02□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Trim28Q62318 834 aa10.02□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Gripap1Q8VD04 806 aa10.02□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Usp16Q99LG0 825 aa10.02□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Rcan3Q9JKK0 239 aa10.02□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Zbtb12Q9Z150 459 aa10.02□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Syce3B5KM66 88 aa10.02□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Usp32F8VPZ3 1604 aa10.02□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Triml2E9PW10 424 aa10.01□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Ecm2Q5FW85 670 aa10.01□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Kdm4aQ8BW72 1064 aa10.01□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Aldh1l2Q8K009 923 aa10.01□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Nol7Q9D7Z3 254 aaKnown RBP10.01□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Brpf1B2RRD7 1212 aa10.01□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Kif4P33174 1231 aa10.01□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Pank2Q3U4S0 443 aa10.01□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Senp3Q9EP97 568 aaKnown RBP10.01□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Akap12Q9WTQ5 1684 aa10.01□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Zdhhc9P59268 364 aa10□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Paf1Q8K2T8 535 aa10□□□□□ -0.81
Cdc40-201ENSMUST00000044166 NcapgE9PWG6 1004 aa10□□□□□ -0.81
Cdc40-201ENSMUST00000044166 U2surpQ6NV83 1029 aaKnown RBP10□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Mrps27Q8BK72 415 aaKnown RBP10□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Sos1Q62245 1319 aa10□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Zscan25B2RX31 543 aa10□□□□□ -0.81
Cdc40-201ENSMUST00000044166 MarsQ68FL6 902 aaKnown RBP10□□□□□ -0.81
Cdc40-201ENSMUST00000044166 AdnpQ9Z103 1108 aaKnown RBP10□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Arid3cA6PWV5 409 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Ppp1r15aP17564 657 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Ice2Q3UZ18 988 aaKnown RBP9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Fam13aQ8BGI4 693 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Pnma3Q8JZW8 466 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Prdm2A2A7B5 1709 aaKnown RBP9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Erc2Q6PH08 957 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Rnf214Q8BFU3 668 aaKnown RBP9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Gdpd2Q9ESM6 539 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Gli2Q0VGT2 1544 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Tm6sf1P58749 370 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Mindy4Q3UQI9 744 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Shq1Q7TMX5 569 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Cdk19Q8BWD8 501 aa9.99□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Kank4Q6P9J5 1016 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 OptnQ8K3K8 584 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Q9D2X8 372 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Mroh1E0CZ22 1640 aa9.98□□□□□ -0.81
Cdc40-201ENSMUST00000044166 Map7d2A2AG50 781 aa9.98□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms