RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ssh1Q76I79 1042 aa19.3■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 ClasrpQ8CFC7 668 aa19.3■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 TkfcQ8VC30 578 aa19.3■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Smco2Q9DA21 347 aa19.3■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Naip1Q9QWK5 1403 aa19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Rad54l2Q99NG0 1466 aa19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Hvcn1Q3U2S8 269 aa19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Calml4Q91WQ9 153 aa19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Supt6hQ62383 1726 aaKnown RBP19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Cetn1P41209 172 aa19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Paxip1Q6NZQ4 1056 aa19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Trim25Q61510 634 aaKnown RBP19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Plekhg5Q66T02 1073 aa19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Syce3B5KM66 88 aa19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Bbof1Q3V079 533 aa19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Fam13aQ8BGI4 693 aa19.29■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 4921504E06RikQ8CET2 560 aa19.28■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Ehbp1Q69ZW3 1231 aa19.28■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Top1mtQ8R4U6 593 aa19.28■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Cnnm1Q0GA42 951 aa19.28■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Cog6Q8R3I3 657 aa19.28■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Secisbp2lQ6A098 1086 aaKnown RBP19.28■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Rbm5Q91YE7 815 aaKnown RBP19.28■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Sept6Q9R1T4 434 aa19.28■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Knop1Q9Z2Q2 478 aaKnown RBP19.28■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Hspa4Q61316 841 aa19.27■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Paxbp1P58501 919 aa19.27■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Mum1Q6DID5 682 aa19.27■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Pms1Q8K119 917 aa19.27■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Homer1Q9Z2Y3 366 aa19.27■□□□□ 0.68
Ccdc88a-201ENSMUST00000040182 Ppfibp2O35711 882 aa19.27■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Fnbp4Q6ZQ03 1031 aa19.27■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 ZgpatQ8VDM1 511 aa19.26■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Nol8Q3UHX0 1147 aaKnown RBP19.26■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 AidaQ8C4Q6 305 aa19.26■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Gm21680A0A0G2JGR8 267 aa19.26■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Stx1aO35526 288 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Exoc8Q6PGF7 716 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 PrkcshO08795 521 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Akap2O54931 893 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Trim34aQ99PP6 485 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Ktn1Q61595 1327 aaKnown RBP19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Eif3j1Q3UGC7 261 aaKnown RBP19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Eif3j2Q66JS6 263 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Mybbp1aQ7TPV4 1344 aaKnown RBP19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Kif21aQ9QXL2 1672 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Irgm2A0A140LIF8 407 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Cwc27Q3TKY6 469 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Ripk4Q9ERK0 786 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Znf704Q9ERQ3 566 aa19.25■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Shtn1Q8K2Q9 631 aa19.24■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Samm50Q8BGH2 469 aa19.24■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Top2bQ64511 1612 aa19.24■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Cfap65Q3V0B4 1847 aa19.24■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Gbp1Q01514 589 aa19.24■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Tacc1Q6Y685 774 aa19.24■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 ZwintQ9CQU5 252 aa19.24■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Chrna2Q91X60 512 aa19.23■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Spty2d1Q68FG3 682 aa19.23■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Tubb4aQ9D6F9 444 aa19.23■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Rbm27Q5SFM8 1060 aaKnown RBP19.23■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Skor1Q8BX46 964 aa19.23■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Ddx23D3Z0M9 819 aaKnown RBP19.23■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Jph4Q80WT0 628 aa19.22■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Gm45140A0A0N4SUM8 220 aa19.22■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Vps37dQ810I0 261 aa19.22■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Cdc37l1Q9CZP7 335 aa19.22■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Uri1Q3TLD5 531 aa19.22■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Bcl2l13P59017 434 aa19.22■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Vps36Q91XD6 386 aa19.22■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Igbp1bQ9QZ29 343 aa19.22■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Ctr9Q62018 1173 aaKnown RBP19.21■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Als2cr12Q8BVM7 383 aa19.21■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Ccdc73Q8CDM4 1066 aa19.21■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Wdr63B2RY71 923 aa19.21■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Zranb3Q6NZP1 1069 aa19.21■□□□□ 0.67
Ccdc88a-201ENSMUST00000040182 Crocc2F6XLV1 1638 aa19.2■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Strn4P58404 760 aa19.2■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Mapk8ip1Q9WVI9 707 aa19.2■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Dusp27Q148W8 1138 aa19.2■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Cc2d1bQ8BRN9 848 aa19.2■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Gle1Q8R322 699 aa19.2■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Rnf34Q99KR6 376 aa19.2■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 4921530L21RikQ9CQ47 274 aa19.2■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Gm7298A0A0N4SVU1 1476 aa19.2■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Fam107bQ3TGF2 131 aa19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Sf3b2Q3UJB0 878 aaKnown RBP19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Ddx58Q6Q899 926 aa19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Rapgef4Q9EQZ6 1011 aa19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Babam1Q3UI43 333 aa19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Cep55Q8BT07 462 aa19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Ccdc93Q7TQK5 629 aa19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Pabpn1Q8CCS6 302 aaKnown RBP19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Duox2A2AQ99 1517 aa19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Nop53Q8BK35 484 aaKnown RBP19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Ubap1lG3UW59 384 aa19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Stmn4P63042 189 aa19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Cdca8Q8BHX3 289 aa19.19■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Ccdc150Q8CDI7 1110 aa19.18■□□□□ 0.66
Ccdc88a-201ENSMUST00000040182 Pde4cQ3UEI1 686 aa19.18■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms