RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Sox12Q04890 314 aa30.91■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Parp14Q2EMV9 1817 aa30.9■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 GphnQ8BUV3 769 aaKnown RBP30.9■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Phf23Q8BSN5 401 aa30.89■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Igsf1Q7TQA1 1317 aa30.89■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Trpm3Q5F4S9 1721 aa30.89■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Gm21190A0A0G2JGJ6 266 aa30.89■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Plppr3Q7TPB0 716 aa30.89■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Terf2O35144 541 aa30.88■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 1700019A02RikA0A087WPV9 146 aa30.87■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 Ggnbp2Q5SV77 696 aa30.86■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 Ncapd2Q8K2Z4 1392 aa30.86■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 Aplp1Q03157 653 aa30.86■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 Aifm3Q3TY86 605 aa30.86■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 Tbc1d9Q3UYK3 1264 aa30.85■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 Ano8Q6PB70 1060 aa30.85■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 Triml2E9PW10 424 aa30.83■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 Fgd1P52734 960 aa30.83■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 Fam13aQ8BGI4 693 aa30.83■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 CenppQ9CZ92 286 aa30.83■■■□□ 2.53
Cldnd1-201ENSMUST00000023426 Anapc15-psA0A140T8L6 141 aa30.82■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Catsper2A2ARP9 588 aa30.82■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Sv2bQ8BG39 683 aa30.82■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Nek4Q9Z1J2 792 aa30.82■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Hoxc9P09633 260 aa30.81■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Prim1P20664 417 aa30.81■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 HypkQ9CR41 129 aa30.81■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Antxr1Q9CZ52 562 aa30.81■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 PtprvP70289 1705 aa30.8■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Nckap5lQ6GQX2 1323 aa30.8■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Foxp4Q9DBY0 795 aaKnown RBP30.8■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Prkar2bP31324 416 aa30.79■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Ccne1Q61457 408 aa30.79■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 FanclQ9CR14 375 aa30.78■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Pibf1E9Q6K3 756 aa30.77■■■□□ 2.52
Cldnd1-201ENSMUST00000023426 Msh6P54276 1358 aaKnown RBP30.76■■■□□ 2.51
Cldnd1-201ENSMUST00000023426 Ccdc146E9Q9F7 977 aa30.76■■■□□ 2.51
Cldnd1-201ENSMUST00000023426 Tmem94Q7TSH8 1360 aa30.76■■■□□ 2.51
Cldnd1-201ENSMUST00000023426 Gsdma3Q5Y4Y6 464 aa30.75■■■□□ 2.51
Cldnd1-201ENSMUST00000023426 Irx3P81067 507 aa30.74■■■□□ 2.51
Cldnd1-201ENSMUST00000023426 Kdm4cQ8VCD7 1054 aa30.73■■■□□ 2.51
Cldnd1-201ENSMUST00000023426 Q3TQI7 289 aaKnown RBP30.71■■■□□ 2.51
Cldnd1-201ENSMUST00000023426 Snap23O09044 210 aa30.71■■■□□ 2.51
Cldnd1-201ENSMUST00000023426 ScaperF8VQ70 1398 aaKnown RBP30.71■■■□□ 2.51
Cldnd1-201ENSMUST00000023426 Tfip11Q9ERA6 838 aaKnown RBP30.69■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Atf5O70191 283 aa30.68■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Ncoa4Q5U4H9 625 aa30.68■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 1700010I14RikQ7TPG0 532 aa30.68■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Larp1bA0A0A6YXJ7 370 aaKnown RBP30.66■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Gnai2P08752 355 aaKnown RBP30.66■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 C3P01027 1663 aa30.66■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Arfgef2A2A5R2 1792 aa30.66■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Rsph3aQ3UFY4 516 aa30.65■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Gimap6Q8K349 305 aa30.65■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Slc35g1Q8BY79 368 aa30.65■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Ppip5k2Q6ZQB6 1129 aa30.64■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 GorabQ8BRM2 368 aa30.64■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Rimbp3Q3V0F0 1606 aa30.64■■■□□ 2.5
Cldnd1-201ENSMUST00000023426 Atg4a-psA0A0G2JFS9 396 aa30.64■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Atg4aQ8C9S8 396 aa30.64■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Ppp6r3Q922D4 844 aa30.64■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Cyp46a1Q9WVK8 500 aa30.64■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Ahnak2E9PYB0 1738 aaKnown RBP30.64■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Hoxa7P02830 229 aa30.63■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Nucb1Q02819 459 aaKnown RBP30.63■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Fam83gQ5SWY7 812 aa30.63■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Tmem2Q5FWI3 1383 aa30.63■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Pdia3P27773 505 aaKnown RBP30.62■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Amotl1Q9D4H4 968 aa30.62■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Tmem132eQ6IEE6 982 aa30.61■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Smarca5Q91ZW3 1051 aaKnown RBP30.61■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 4933402E13RikQ9D4D2 429 aa30.61■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Kdm6aO70546 1401 aa30.59■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Stk36Q69ZM6 1316 aa30.59■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Rfx1P48377 963 aa30.59■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Col14a1Q80X19 1797 aa30.58■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Elp1Q7TT37 1333 aaKnown RBP30.58■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Nsfl1cQ9CZ44 370 aaKnown RBP30.58■■■□□ 2.49
Cldnd1-201ENSMUST00000023426 Tns3Q5SSZ5 1440 aa30.57■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Kcnh5Q920E3 988 aa30.57■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Nphp1Q9QY53 687 aa30.57■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Nup153E9Q3G8 1462 aaKnown RBP30.56■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 MyclP10166 368 aa30.56■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 EngaseQ8BX80 734 aa30.56■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Pnpla7A2AJ88 1352 aa30.56■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Atp8b2P98199 1209 aa30.55■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 TatQ8QZR1 454 aa30.55■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Robo1O89026 1612 aa30.55■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Chpf2Q3UU43 768 aa30.55■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Ssh1Q76I79 1042 aa30.55■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 TimelessQ9R1X4 1197 aa30.55■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Nfat5Q9WV30 1534 aa30.54■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Cnksr1A2A9K7 700 aa30.54■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Fyb1O35601 819 aa30.54■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Gtf3c3Q3TMP1 882 aa30.53■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Srgap3Q812A2 1099 aa30.53■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Disp3A3KFU9 1347 aa30.53■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Sipa1l2Q80TE4 1722 aa30.53■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Myo5bP21271 1818 aa30.53■■■□□ 2.48
Cldnd1-201ENSMUST00000023426 Ppp1r42Q8R1Z4 357 aa30.53■■■□□ 2.48
Retrieved 100 of 22,080 RNA–protein pairs in 67.9 ms