RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 InhbeO08717 350 aa9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Ipo8Q7TMY7 1010 aa9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Cetn4Q8K4K1 168 aa9.73□□□□□ -0.85
Lig3-201ENSMUST00000021039 Strn4P58404 760 aa9.72□□□□□ -0.85
Lig3-201ENSMUST00000021039 Egfem1Q8C088 590 aa9.72□□□□□ -0.85
Lig3-201ENSMUST00000021039 Ercc6l2Q9JIM3 1537 aa9.72□□□□□ -0.85
Lig3-201ENSMUST00000021039 Cep152A2AUM9 1736 aaKnown RBP9.72□□□□□ -0.85
Lig3-201ENSMUST00000021039 Kcnn1Q9EQR3 537 aa9.72□□□□□ -0.85
Lig3-201ENSMUST00000021039 Smarce1O54941 411 aaKnown RBP9.72□□□□□ -0.85
Lig3-201ENSMUST00000021039 Smarcc1P97496 1104 aa9.72□□□□□ -0.85
Lig3-201ENSMUST00000021039 Uspl1Q3ULM6 1089 aa9.72□□□□□ -0.85
Lig3-201ENSMUST00000021039 PtprmP28828 1452 aa9.72□□□□□ -0.85
Lig3-201ENSMUST00000021039 ShprhQ7TPQ3 1674 aa9.71□□□□□ -0.85
Lig3-201ENSMUST00000021039 Efcab2Q9CQ46 164 aa9.71□□□□□ -0.85
Lig3-201ENSMUST00000021039 SafbD3YXK2 937 aaKnown RBP9.71□□□□□ -0.86
Lig3-201ENSMUST00000021039 Mcm2P97310 904 aa9.71□□□□□ -0.86
Lig3-201ENSMUST00000021039 Iffo2Q8R2V2 512 aa9.71□□□□□ -0.86
Lig3-201ENSMUST00000021039 Atxn3Q9CVD2 355 aa9.71□□□□□ -0.86
Lig3-201ENSMUST00000021039 Ddx58Q6Q899 926 aa9.71□□□□□ -0.86
Lig3-201ENSMUST00000021039 PhaxQ9JJT9 385 aaKnown RBP9.71□□□□□ -0.86
Lig3-201ENSMUST00000021039 Nsfl1cQ9CZ44 370 aaKnown RBP9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Chpf2Q3UU43 768 aa9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Isy1Q69ZQ2 285 aaKnown RBP9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Mum1Q6DID5 682 aa9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Nphp1Q9QY53 687 aa9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Scaf11E9PZM7 1456 aaKnown RBP9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Prex1Q69ZK0 1650 aa9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Ankle2Q6P1H6 964 aa9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Aldh1l1Q8R0Y6 902 aa9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Ccdc47Q9D024 483 aaKnown RBP9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 MvpQ9EQK5 861 aa9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Prl7d1P04769 244 aa9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Znf710Q3U288 666 aa9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Rbm26Q6NZN0 1012 aaKnown RBP9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Cyp46a1Q9WVK8 500 aa9.7□□□□□ -0.86
Lig3-201ENSMUST00000021039 Irf9Q61179 399 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Prkrip1Q9CWV6 186 aaKnown RBP9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Iqgap3F8VQ29 1632 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Hoxa7P02830 229 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Tnnt2P50752 301 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Slf2Q6P9P0 1278 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 GorabQ8BRM2 368 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Taf7Q9R1C0 341 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Brinp3Q499E0 766 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Plekhm2Q80TQ5 1018 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Kdm6aO70546 1401 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 CrcpO35427 148 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Map3k13Q1HKZ5 959 aa9.69□□□□□ -0.86
Lig3-201ENSMUST00000021039 Ttc5Q99LG4 440 aa9.68□□□□□ -0.86
Lig3-201ENSMUST00000021039 Myo5cE9Q1F5 1742 aa9.68□□□□□ -0.86
Lig3-201ENSMUST00000021039 Topbp1Q6ZQF0 1515 aa9.68□□□□□ -0.86
Lig3-201ENSMUST00000021039 Nckap5lQ6GQX2 1323 aa9.68□□□□□ -0.86
Lig3-201ENSMUST00000021039 PtmsQ9D0J8 101 aaKnown RBP9.68□□□□□ -0.86
Lig3-201ENSMUST00000021039 Psrc1Q9D0P7 329 aa9.68□□□□□ -0.86
Lig3-201ENSMUST00000021039 Cwc27Q3TKY6 469 aa9.68□□□□□ -0.86
Lig3-201ENSMUST00000021039 SkilQ60665 675 aa9.68□□□□□ -0.86
Lig3-201ENSMUST00000021039 Nip7Q9CXK8 180 aaKnown RBP9.68□□□□□ -0.86
Lig3-201ENSMUST00000021039 Calcoco2A2A6M5 331 aa9.67□□□□□ -0.86
Lig3-201ENSMUST00000021039 VgfQ0VGU4 617 aa9.67□□□□□ -0.86
Lig3-201ENSMUST00000021039 Sytl4Q9R0Q1 673 aa9.67□□□□□ -0.86
Lig3-201ENSMUST00000021039 Ifit1bl2Q3U687 466 aa9.67□□□□□ -0.86
Lig3-201ENSMUST00000021039 UvssaQ9D479 717 aa9.67□□□□□ -0.86
Lig3-201ENSMUST00000021039 Fam71e1A1L3C1 212 aa9.67□□□□□ -0.86
Lig3-201ENSMUST00000021039 Gm973E9Q295 1059 aa9.67□□□□□ -0.86
Lig3-201ENSMUST00000021039 Hmox1P14901 289 aa9.67□□□□□ -0.86
Lig3-201ENSMUST00000021039 Spryd3E9Q9B3 442 aa9.67□□□□□ -0.86
Lig3-201ENSMUST00000021039 Anapc15P60007 132 aa9.67□□□□□ -0.86
Lig3-201ENSMUST00000021039 Tomm22Q9CPQ3 142 aa9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 Echdc1Q9D9V3 322 aa9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 Tmem2Q5FWI3 1383 aa9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 Med14A2ABV5 1459 aaKnown RBP9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 Srgap3Q812A2 1099 aa9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 Adgrl1Q80TR1 1466 aa9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 Atp6v1dP57746 247 aa9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 Gsdma2Q32M21 443 aa9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 Taok3Q8BYC6 898 aa9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 GckrQ91X44 587 aa9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 Rims2Q9EQZ7 1530 aa9.66□□□□□ -0.86
Lig3-201ENSMUST00000021039 Ncapd2Q8K2Z4 1392 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Hap1O35668 628 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 EappQ5BU09 281 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Sik1Q60670 779 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Slc35g1Q8BY79 368 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Arhgef28P97433 1693 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Zkscan2G3X952 960 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Myd88P22366 296 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Rnf20Q5DTM8 973 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Maco1Q7TQE6 664 aaKnown RBP9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Gcc1Q9D4H2 778 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Ell2Q3UKU1 639 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Phkg2Q9DB30 406 aa9.65□□□□□ -0.86
Lig3-201ENSMUST00000021039 Jdp2P97875 163 aa9.65□□□□□ -0.87
Lig3-201ENSMUST00000021039 Trim28Q62318 834 aa9.65□□□□□ -0.87
Lig3-201ENSMUST00000021039 Mbd5B1AYB6 1498 aa9.64□□□□□ -0.87
Lig3-201ENSMUST00000021039 Erich6bQ9D4S6 220 aa9.64□□□□□ -0.87
Lig3-201ENSMUST00000021039 Cdhr2E9Q7P9 1308 aa9.64□□□□□ -0.87
Lig3-201ENSMUST00000021039 Tecpr2Q3UH45 1423 aa9.64□□□□□ -0.87
Lig3-201ENSMUST00000021039 4930407I10RikD3Z5T8 1512 aa9.64□□□□□ -0.87
Lig3-201ENSMUST00000021039 ArsiQ32KI9 573 aa9.64□□□□□ -0.87
Lig3-201ENSMUST00000021039 Map3k2Q61083 619 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms