RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Dhx29Q6PGC1 1365 aaKnown RBP14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 BcanQ61361 883 aa14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Lemd3Q9WU40 921 aa14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Cavin4A2AMM0 362 aa14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Sh3bp1P55194 680 aa14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Shtn1Q8K2Q9 631 aa14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Chrna2Q91X60 512 aa14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Gzf1Q4VBD9 706 aa14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Arhgef18Q6P9R4 1021 aa14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Rbm33Q9CXK9 1231 aaKnown RBP14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 U2af2P26369 475 aaKnown RBP14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Ddx46Q569Z5 1032 aaKnown RBP14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Clcn1Q64347 994 aa14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Lrrc45Q8CIM1 670 aa14.22□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 HdgfP51859 237 aaKnown RBP14.21□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Q4VA45 678 aa14.21□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Ercc6lQ8BHK9 1240 aa14.21□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Ccdc178Q8CDV0 866 aa14.21□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Fam76aQ922G2 307 aa14.21□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Ankrd36D3Z4K0 1415 aa14.21□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Bin1O08539 588 aaKnown RBP14.21□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Cpsf2O35218 782 aaKnown RBP14.21□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Gjb2Q00977 226 aa14.21□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Srgap3Q812A2 1099 aa14.21□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Rab3gap2Q8BMG7 1366 aa14.21□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ap3b2Q9JME5 1082 aa14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 L1td1Q587J6 782 aaKnown RBP14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Usp25P57080 1055 aa14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ptpdc1Q6NZK8 747 aa14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Pms1Q8K119 917 aa14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Chmp7Q8R1T1 451 aa14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Smco2Q9DA21 347 aa14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Gbp2Q9Z0E6 589 aa14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Irgm2A0A140LIF8 407 aa14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Calcoco1Q8CGU1 691 aa14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Cfap53Q9D439 514 aa14.2□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Rpap1Q80TE0 1409 aa14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Cfap73J3QPZ5 306 aa14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Stx1aO35526 288 aa14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Brd2Q7JJ13 798 aaKnown RBP14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 MvpQ9EQK5 861 aa14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Sel1lQ9Z2G6 790 aa14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 ScaperF8VQ70 1398 aaKnown RBP14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Maco1Q7TQE6 664 aaKnown RBP14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 UvssaQ9D479 717 aa14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Arid3cA6PWV5 409 aa14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 ZwintQ9CQU5 252 aa14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 TbcaP48428 108 aaKnown RBP14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Naa15Q80UM3 865 aaKnown RBP14.19□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ube2hP62257 183 aa14.18□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Nol7Q9D7Z3 254 aaKnown RBP14.18□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Rsrc1Q9DBU6 334 aa14.18□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ccdc66Q6NS45 935 aa14.18□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Il4rP16382 810 aa14.18□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 StambpQ9CQ26 424 aa14.18□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Lmbr1Q9JIT0 490 aa14.18□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Tbc1d8Q9Z1A9 1134 aa14.18□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Zfp397Q7TNK4 527 aa14.18□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ppfibp1Q8C8U0 969 aaKnown RBP14.18□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Gm3409A0A0G2JE67 319 aa14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Snx13Q6PHS6 957 aa14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Gigyf2Q6Y7W8 1291 aaKnown RBP14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Rufy2Q8R4C2 606 aa14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Sart1Q9Z315 806 aaKnown RBP14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Hdhd2Q3UGR5 259 aa14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Fam13aQ8BGI4 693 aa14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Rsph10bE9PYQ0 876 aa14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Gucy1a3Q9ERL9 691 aa14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Gm21190A0A0G2JGJ6 266 aa14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ccdc42Q5SV66 316 aa14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ddx19aQ61655 478 aaKnown RBP14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 4933428M09RikQ9D3X3 192 aa14.17□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Capn2O08529 700 aa14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Cyp26c1B2RXA7 518 aa14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Wdr63B2RY71 923 aa14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ccdc6D3YZP9 469 aa14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Hip1rQ9JKY5 1068 aa14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Gm21680A0A0G2JGR8 267 aa14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Cplx4Q80WM3 160 aa14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Stx6Q9JKK1 255 aa14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Cdkl5Q3UTQ8 938 aa14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Zswim4Q8C7B8 1101 aa14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ddx27Q921N6 760 aaKnown RBP14.16□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Rapgef2Q8CHG7 1496 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Catsper2A2ARP9 588 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Brd1E9PZ26 1189 aaKnown RBP14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 TchpQ3TVW5 497 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ddx49Q4FZF3 480 aaKnown RBP14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Kif5bQ61768 963 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Shq1Q7TMX5 569 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 ZfxP17012 799 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Eif3j1Q3UGC7 261 aaKnown RBP14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Eif3j2Q66JS6 263 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Gys2Q8VCB3 704 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Igbp1bQ9QZ29 343 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Cfap157Q0VFX2 523 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Fsd2Q8BZ52 692 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Smarca5Q91ZW3 1051 aaKnown RBP14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Ankrd1Q9CR42 319 aa14.15□□□□□ -0.14
Pcdhac1-201ENSMUST00000007584 Gbp1Q01514 589 aa14.14□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms