RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CDH4P55283 916 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 ARSKQ6UWY0 536 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 NECAB3Q96P71 396 aaPredicted RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 C17orf62Q9BQA9 187 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 GRIN2AQ12879 1464 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 ELOA3DA6NLF2 546 aaPredicted RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 HOXB8P17481 243 aaPredicted RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 TARSP26639 723 aaKnown RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 EIF2B2P49770 351 aaKnown RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 RPS15P62841 145 aaKnown RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 PRR5P85299 388 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 GIT2Q14161 759 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 ELOA3BQ3SY89 546 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 SCUBE3Q8IX30 993 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 ELOA2Q8IYF1 753 aaPredicted RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 GPC2Q8N158 579 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 ELOA3Q8NG57 546 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 GTPBP3Q969Y2 492 aaKnown RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 PTPN18Q99952 460 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 PFDN2Q9UHV9 154 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 BTBD17A6NE02 478 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 PRKCHP24723 683 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 UQCRC1P31930 480 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 NR0B1P51843 470 aaKnown RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 RPL38P63173 70 aaKnown RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 CPSF6Q16630 551 aaKnown RBP eCLIP12.57□□□□□ -0.4
TCF4-248ENST00000616053 NCSTNQ92542 709 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 THOC2Q8NI27 1593 aaKnown RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 ABCB7O75027 752 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 STBD1O95210 358 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 MGAT1P26572 445 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 CDKN1CP49918 316 aaPredicted RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 RCAN1P53805 252 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 FRG1Q14331 258 aaKnown RBP12.57□□□□□ -0.4
TCF4-248ENST00000616053 ZYG11AQ6WRX3 759 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 KIF2BQ8N4N8 673 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 C22orf15Q8WYQ4 148 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 HINT2Q9BX68 163 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 ALG9Q9H6U8 611 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 UNC13AQ9UPW8 1703 aa12.57□□□□□ -0.4
TCF4-248ENST00000616053 CHST10O43529 356 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 TMEM192Q8IY95 271 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 ARAP1Q96P48 1450 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 WDR24Q96S15 920 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 CPNE1Q99829 537 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 NPC1L1Q9UHC9 1359 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 ZNF175Q9Y473 711 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 PCDHA3Q9Y5H8 950 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 MRASO14807 208 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 SHOXO15266 292 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 RIPK2O43353 540 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 CLN5O75503 358 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 RECQL4O94761 1208 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 SERPINE1P05121 402 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 EIF1AXP47813 144 aaKnown RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 APLP1P51693 650 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 DNM1P34Q6PK57 102 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 KCNT2Q6UVM3 1135 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 SLC9B2Q86UD5 537 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 PPP3R2Q96LZ3 170 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 FAM117AQ9C073 453 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 LY9Q9HBG7 655 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 IFNA21P01568 189 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 NR2C2P49116 596 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 GYS2P54840 703 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 TROAPQ12815 778 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 DPYSL2Q16555 572 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 LPCAT2Q7L5N7 544 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 ZNF627Q7L945 461 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 ZNF101Q8IZC7 436 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 OR2L2Q8NH16 312 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 KLHL5Q96PQ7 755 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 ADAMTS3O15072 1205 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 FESP07332 822 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 SLC1A6P48664 564 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 SEPHS1P49903 392 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 ZNF234Q14588 700 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 MPPED2Q15777 294 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 IL23RQ5VWK5 629 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 SLC9A9Q8IVB4 645 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 OR9K2Q8NGE7 335 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 CCDC120Q96HB5 630 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 POP1Q99575 1024 aaKnown RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 KLC4Q9NSK0 619 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 CNOT6Q9ULM6 557 aaKnown RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 KHNYNO15037 678 aaKnown RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 VHLP40337 213 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 MAP3K8P41279 467 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 FASLGP48023 281 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 AP3S2P59780 193 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 ZC3H12AQ5D1E8 599 aaKnown RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 GDF6Q6KF10 455 aaPredicted RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 APBB2Q92870 758 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 NPAS2Q99743 824 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 C9orf16Q9BUW7 83 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 ROPN1BQ9BZX4 212 aaPredicted RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 ROPN1Q9HAT0 212 aaPredicted RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 TMPRSS4Q9NRS4 437 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 CIDEBQ9UHD4 219 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 AGO1Q9UL18 857 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms