RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 CARM1Q86X55 608 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 SLAIN1Q8ND83 568 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 RNF217Q8TC41 542 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 OVCA2Q8WZ82 227 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.88□□□□□ -0.672e-8■■■□□ 18.8
SEC31A-228ENST00000509142 MRPS26Q9BYN8 205 aaKnown RBP10.88□□□□□ -0.67
SEC31A-228ENST00000509142 RNF38Q9H0F5 515 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 LIN28AQ9H9Z2 209 aaKnown RBP10.88□□□□□ -0.67
SEC31A-228ENST00000509142 PFDN4Q9NQP4 134 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 PTTG2Q9NZH5 202 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 TMEM181Q9P2C4 612 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 TIMM22Q9Y584 194 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 C2orf78A6NCI8 922 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 MTHFD2P13995 350 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 SUOXP51687 545 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 FOXA1P55317 472 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 CDH18Q13634 790 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 AARS2Q5JTZ9 985 aaKnown RBP10.88□□□□□ -0.67
SEC31A-228ENST00000509142 CHST9Q7L1S5 443 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 SIDT2Q8NBJ9 832 aaKnown RBP10.88□□□□□ -0.67
SEC31A-228ENST00000509142 ZNF461Q8TAF7 563 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 TMEM169Q96HH4 297 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 RPL10LQ96L21 214 aaKnown RBP10.88□□□□□ -0.67
SEC31A-228ENST00000509142 HGH1Q9BTY7 390 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 NOL11Q9H8H0 719 aaKnown RBP10.88□□□□□ -0.67
SEC31A-228ENST00000509142 GPBP1L1Q9HC44 474 aaPredicted RBP10.88□□□□□ -0.67
SEC31A-228ENST00000509142 MAP10Q9P2G4 905 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 CASP8AP2Q9UKL3 1982 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 LAMA3Q16787 3333 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 PLXNA3P51805 1871 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 H3BNC9 293 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 SOCS2O14508 198 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 OR1I1O60431 355 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 PRLP01236 227 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 ATP6V1B2P21281 511 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 CTBSQ01459 385 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 PSAPL1Q6NUJ1 521 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 FRA10AC1Q70Z53 315 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 GPSM1Q86YR5 675 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 PIANPQ8IYJ0 282 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 B4GALNT2Q8NHY0 566 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 LINGO1Q96FE5 620 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 HIPK3Q9H422 1215 aa10.88□□□□□ -0.67
SEC31A-228ENST00000509142 GREB1Q4ZG55 1949 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 A0A0U1RQS6 177 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 FGF4P08620 206 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 GNAO1P09471 354 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CDH2P19022 906 aaPredicted RBP10.87□□□□□ -0.67
SEC31A-228ENST00000509142 ACADVLP49748 655 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 ARHGEF6Q15052 776 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 VPS26BQ4G0F5 336 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 ESAMQ96AP7 390 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 PBXIP1Q96AQ6 731 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 TM6SF2Q9BZW4 377 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 NDUFAF1Q9Y375 327 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 YIPF1Q9Y548 306 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 BACE2Q9Y5Z0 518 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 GOLGA8CPA6NN73 597 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 TIPRLO75663 272 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 HMGA1P17096 107 aaKnown RBP10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CTPS1P17812 591 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CR2P20023 1033 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CASP2P42575 452 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CDH15P55291 814 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 TXNL4AP83876 142 aaKnown RBP10.87□□□□□ -0.67
SEC31A-228ENST00000509142 ECT2LQ008S8 904 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 GRB7Q14451 532 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 PTPRRQ15256 657 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 TCTN1Q2MV58 587 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 SCIMPQ6UWF3 145 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CANT1Q8WVQ1 401 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 IGSF21Q96ID5 467 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 NSMCE3Q96MG7 304 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 UHRF1Q96T88 793 aaPredicted RBP10.87□□□□□ -0.67
SEC31A-228ENST00000509142 ZBED2Q9BTP6 218 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 HACD3Q9P035 362 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CNOT11Q9UKZ1 510 aaKnown RBP10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CNOT6Q9ULM6 557 aaKnown RBP10.87□□□□□ -0.67
SEC31A-228ENST00000509142 FCF1Q9Y324 198 aaKnown RBP10.87□□□□□ -0.67
SEC31A-228ENST00000509142 SNX13Q9Y5W8 968 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CDK4P11802 303 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 GPX3P22352 226 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 MZF1P28698 734 aaPredicted RBP10.87□□□□□ -0.67
SEC31A-228ENST00000509142 ATP4BP51164 291 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 APLP1P51693 650 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 TRAF2Q12933 501 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 ATXN7L2Q5T6C5 722 aaPredicted RBP10.87□□□□□ -0.67
SEC31A-228ENST00000509142 B3GNT6Q6ZMB0 384 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 DHFR2Q86XF0 187 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 HIC2Q96JB3 615 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CEP295NLQ96MC4 621 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 CLSTN3Q9BQT9 956 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 GID8Q9NWU2 228 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 PLK2Q9NYY3 685 aa10.87□□□□□ -0.67
SEC31A-228ENST00000509142 AGTR2P50052 363 aa10.86□□□□□ -0.67
SEC31A-228ENST00000509142 EMP3P54852 163 aa10.86□□□□□ -0.67
SEC31A-228ENST00000509142 TBC1D25Q3MII6 688 aa10.86□□□□□ -0.67
SEC31A-228ENST00000509142 NHSL2Q5HYW2 709 aa10.86□□□□□ -0.67
SEC31A-228ENST00000509142 PTRHD1Q6GMV3 140 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms