RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 HcrtO55241 130 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cnr2P47936 347 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ephb2P54763 986 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Esrp1Q3US41 680 aaKnown RBP6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nutm2Q3V0C3 733 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Taar8aQ5QD07 344 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 HiraQ61666 1015 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 CcncQ62447 283 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Inpp4bQ6P1Y8 924 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ppm1nQ8BGL1 404 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Orai2Q8BH10 250 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cox14Q8BH51 57 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Q8BL95 290 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cdh7Q8BM92 785 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cfap20Q8BTU1 193 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sash3Q8K352 380 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gtf2h3Q8VD76 309 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr665Q8VG79 316 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Snx5Q9D8U8 404 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fundc1Q9DB70 155 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Prmt1Q9JIF0 371 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 BC034090A0A087WP46 1202 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm45233A0A0N4SVE0 221 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zbtb34A2ATY4 518 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Clip3B9EHT4 547 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Hsf3D0VYS2 492 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp395E9Q5N9 508 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp105G3X9I0 524 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gp1baO35930 734 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 InaP46660 501 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Arl4cP61208 192 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 MybphP70402 483 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Grb7Q03160 535 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Krt26Q3TRJ4 462 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm527Q4KL13 310 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mfsd3Q5U419 412 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Il10raQ61727 575 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ptk6Q64434 451 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Klhdc10Q6PAR0 439 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sarm1Q6PDS3 724 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cfap206Q6PE87 622 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Lats2Q7TSJ6 1042 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Bcas1Q80YN3 633 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Efemp1Q8BPB5 493 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Usp43Q8BUM9 1132 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Clic5Q8BXK9 251 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr525Q8VGL5 309 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 NoboxQ8VIH1 527 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Arhgef3Q91X46 524 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 DcxrQ91X52 244 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zcchc12Q9CZA5 402 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gprc5dQ9JIL6 344 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sh2d3cQ9QZS8 854 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ttll11A4Q9F4 727 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Vmn2r118E9Q1C1 853 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rnf169E9Q7F2 694 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Vmn2r88L7N1W8 857 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 NmbrO54799 390 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dnmt3aO88508 908 aaKnown RBP6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Grap2O89100 322 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Traf2P39429 501 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ap1s1P61967 158 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cuzd1P70412 606 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Prss48Q14B25 312 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cd300lgQ1ERP8 331 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Q3TTL0 348 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Akt2Q60823 481 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fzd6Q61089 709 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Itih3Q61704 889 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rab3ipQ68EF0 428 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Vmn2r26Q6TAC4 855 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Stx16Q8BVI5 326 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Atg16l1Q8C0J2 607 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dclre1bQ8C7W7 541 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fbxl8Q8CIG9 374 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tti1Q91V83 1085 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cdk9Q99J95 372 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Wdr6Q99ME2 1125 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Kif19Q99PT9 997 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Wdr45bQ9CR39 344 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Creb3l4Q9D2A5 370 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dennd4aE9Q8V6 1869 aa6.85□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Wfdc11A2A5H7 82 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ttc30a2A2AKQ8 664 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm14459A2BI73 179 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 JrklB2RRL2 523 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zbtb10E9Q8X5 861 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm3424L7N298 263 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm8246M0QWX9 263 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Smad6O35182 495 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ptpn20O55082 426 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Krt1P04104 637 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Anxa6P14824 673 aaKnown RBP6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Bmp6P20722 510 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 PdgfraP26618 1089 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Hnf1bP27889 558 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Alox12P39655 663 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nat1P50294 290 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pfdn6Q03958 127 aa6.84□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Bcap29Q61334 240 aa6.84□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 74.1 ms