Protein–RNA interactions for Protein: Q8BM92

Cdh7, Cadherin-7, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh7Q8BM92 Gm25239-201ENSMUST00000174915 86 ntBASIC39.29■■■■□ 3.88
Cdh7Q8BM92 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
Cdh7Q8BM92 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Cdh7Q8BM92 Gm15042-201ENSMUST00000120212 883 ntBASIC34.12■■■■□ 3.05
Cdh7Q8BM92 Gm24109-201ENSMUST00000175489 103 ntBASIC34.12■■■■□ 3.05
Cdh7Q8BM92 Gm15045-201ENSMUST00000117359 883 ntBASIC33.3■■■□□ 2.92
Cdh7Q8BM92 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Cdh7Q8BM92 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
Cdh7Q8BM92 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Cdh7Q8BM92 Gm23366-201ENSMUST00000175022 89 ntBASIC32.82■■■□□ 2.84
Cdh7Q8BM92 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cdh7Q8BM92 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Cdh7Q8BM92 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Cdh7Q8BM92 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.92■■■□□ 2.7
Cdh7Q8BM92 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cdh7Q8BM92 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.64■■■□□ 2.66
Cdh7Q8BM92 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.63■■■□□ 2.65
Cdh7Q8BM92 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Cdh7Q8BM92 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Cdh7Q8BM92 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Cdh7Q8BM92 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Cdh7Q8BM92 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Cdh7Q8BM92 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Cdh7Q8BM92 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cdh7Q8BM92 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.13■■■□□ 2.57
Cdh7Q8BM92 Gm25238-201ENSMUST00000174914 89 ntBASIC31.07■■■□□ 2.56
Cdh7Q8BM92 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Cdh7Q8BM92 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.94■■■□□ 2.54
Cdh7Q8BM92 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cdh7Q8BM92 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Cdh7Q8BM92 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Cdh7Q8BM92 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cdh7Q8BM92 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cdh7Q8BM92 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
Cdh7Q8BM92 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.4■■■□□ 2.46
Cdh7Q8BM92 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Cdh7Q8BM92 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cdh7Q8BM92 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.19■■■□□ 2.42
Cdh7Q8BM92 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
Cdh7Q8BM92 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cdh7Q8BM92 Psd-208ENSMUST00000224556 2034 ntBASIC30.15■■■□□ 2.42
Cdh7Q8BM92 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Cdh7Q8BM92 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.12■■■□□ 2.41
Cdh7Q8BM92 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Cdh7Q8BM92 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Cdh7Q8BM92 Gm25262-201ENSMUST00000174934 133 ntBASIC29.92■■■□□ 2.38
Cdh7Q8BM92 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.87■■■□□ 2.37
Cdh7Q8BM92 Gm27325-201ENSMUST00000175467 74 ntBASIC29.87■■■□□ 2.37
Cdh7Q8BM92 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.74■■■□□ 2.35
Cdh7Q8BM92 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Cdh7Q8BM92 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Cdh7Q8BM92 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.49■■■□□ 2.31
Cdh7Q8BM92 Rab21-202ENSMUST00000218831 843 ntBASIC29.48■■■□□ 2.31
Cdh7Q8BM92 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.43■■■□□ 2.3
Cdh7Q8BM92 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Cdh7Q8BM92 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.37■■■□□ 2.29
Cdh7Q8BM92 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cdh7Q8BM92 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Cdh7Q8BM92 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
Cdh7Q8BM92 Gm26115-201ENSMUST00000175605 87 ntBASIC29.27■■■□□ 2.28
Cdh7Q8BM92 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.25■■■□□ 2.27
Cdh7Q8BM92 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.22■■■□□ 2.27
Cdh7Q8BM92 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Cdh7Q8BM92 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Cdh7Q8BM92 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Cdh7Q8BM92 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Cdh7Q8BM92 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.06■■■□□ 2.24
Cdh7Q8BM92 Gm8109-201ENSMUST00000194076 746 ntBASIC29.05■■■□□ 2.24
Cdh7Q8BM92 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.03■■■□□ 2.24
Cdh7Q8BM92 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Cdh7Q8BM92 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Cdh7Q8BM92 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.95■■■□□ 2.22
Cdh7Q8BM92 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.89■■■□□ 2.22
Cdh7Q8BM92 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cdh7Q8BM92 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cdh7Q8BM92 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.84■■■□□ 2.21
Cdh7Q8BM92 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cdh7Q8BM92 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.83■■■□□ 2.21
Cdh7Q8BM92 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Cdh7Q8BM92 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Cdh7Q8BM92 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cdh7Q8BM92 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cdh7Q8BM92 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cdh7Q8BM92 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Cdh7Q8BM92 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Cdh7Q8BM92 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cdh7Q8BM92 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Cdh7Q8BM92 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cdh7Q8BM92 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Cdh7Q8BM92 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.52■■■□□ 2.16
Cdh7Q8BM92 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cdh7Q8BM92 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cdh7Q8BM92 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.46■■■□□ 2.15
Cdh7Q8BM92 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.45■■■□□ 2.14
Cdh7Q8BM92 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
Cdh7Q8BM92 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cdh7Q8BM92 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Cdh7Q8BM92 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.34■■■□□ 2.13
Cdh7Q8BM92 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cdh7Q8BM92 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms