RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 TRIOO75962 3097 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 WDR87Q6ZQQ6 2873 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 TRANK1O15050 2925 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 PLXNA1Q9UIW2 1896 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 BRWD1Q9NSI6 2320 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 CFAP54Q96N23 3096 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 USP34Q70CQ2 3546 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 NPHP1O15259 732 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 ZIC3O60481 467 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 NDUFS7O75251 213 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 TBX6O95947 436 aaPredicted RBP2.81□□□□□ -1.96
VAPA-208ENST00000584796 HSP90AB1P08238 724 aaKnown RBP2.81□□□□□ -1.96
VAPA-208ENST00000584796 ZNF883P0CG24 379 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 SRD5A1P18405 259 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 CD53P19397 219 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 CD72P21854 359 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 HNF1BP35680 557 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 PRKAA2P54646 552 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 ICA1Q05084 483 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 ZRSR2Q15696 482 aaKnown RBP2.81□□□□□ -1.96
VAPA-208ENST00000584796 ZNF790Q6PG37 636 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 SLC26A9Q7LBE3 791 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 NGEFQ8N5V2 710 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 DEFB123Q8N688 67 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 LINS1Q8NG48 757 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 OR13A1Q8NGR1 328 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 EVI5LQ96CN4 794 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 RNFT2Q96EX2 444 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 GUCD1Q96NT3 240 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 TWSG1Q9GZX9 223 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 MAF1Q9H063 256 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 TTC12Q9H892 705 aaPredicted RBP2.81□□□□□ -1.96
VAPA-208ENST00000584796 MTMR10Q9NXD2 777 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 C1RLQ9NZP8 487 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 CDC14AQ9UNH5 594 aa2.81□□□□□ -1.96
VAPA-208ENST00000584796 COL2A1P02458 1487 aaPredicted RBP2.81□□□□□ -1.96
VAPA-208ENST00000584796 RLFQ13129 1914 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 ATAD5Q96QE3 1844 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 CEMIPQ8WUJ3 1361 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 KIF7Q2M1P5 1343 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 ATXN2Q99700 1313 aaKnown RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 HMX3A6NHT5 357 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 CBY3A6NI87 242 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 IFRD1O00458 451 aaPredicted RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 ECE2O60344 883 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 KRT38O76015 456 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 RGS11O94810 467 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 NDUFB4O95168 129 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 STARD3NLO95772 234 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 LDHAP00338 332 aaKnown RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 CENPBP07199 599 aaPredicted RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 RNF224P0DH78 156 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 ITGAXP20702 1163 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 HMGB2P26583 209 aaKnown RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 HNRNPH1P31943 449 aaKnown RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 NR0B1P51843 470 aaKnown RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 LINC01547P58512 204 aaPredicted RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 GOLGA8FQ08AF8 430 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 DHX8Q14562 1220 aaKnown RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 PKN2Q16513 984 aaKnown RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 SLC18A3Q16572 532 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 TMEM30BQ3MIR4 351 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 PAPPA-AS1Q5QFB9 102 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 CBWD5Q5RIA9 395 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 SYCP2LQ5T4T6 812 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 CCNI2Q6ZMN8 369 aaPredicted RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 DSG4Q86SJ6 1040 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 SLC9B2Q86UD5 537 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 NFE4Q86UQ8 179 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 CACNA2D3Q8IZS8 1091 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 DNAAF1Q8NEP3 725 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 DBF4BQ8NFT6 615 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 CSGALNACT1Q8TDX6 532 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 HSPH1Q92598 858 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 GOLGA1Q92805 767 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 SNAPC3Q92966 411 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 SLC39A13Q96H72 371 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 THUMPD2Q9BTF0 503 aaKnown RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 ABCF3Q9NUQ8 709 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 MIS18AQ9NYP9 233 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 POLLQ9UGP5 575 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 KCNS2Q9ULS6 477 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 ATP6V0A2Q9Y487 856 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 GREB1LQ9C091 1923 aaPredicted RBP2.8□□□□□ -1.96
VAPA-208ENST00000584796 MYH13Q9UKX3 1938 aa2.8□□□□□ -1.96
VAPA-208ENST00000584796 CDHR2Q9BYE9 1310 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 A0A0U1RQF3 1178 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 CCDC189A1A4V9 331 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 LILRA5A6NI73 299 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 SOCS6O14544 535 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 PLRG1O43660 514 aaKnown RBP2.79□□□□□ -1.96
VAPA-208ENST00000584796 ATP2C2O75185 946 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 CSTBP04080 98 aaKnown RBP2.79□□□□□ -1.96
VAPA-208ENST00000584796 SETSIPP0DME0 302 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 KRT5P13647 590 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 HLA-DOBP13765 273 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 CHATP28329 748 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 SERPINB3P29508 390 aa2.79□□□□□ -1.96
VAPA-208ENST00000584796 ALDH1B1P30837 517 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms