RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 SLC27A1Q6PCB7 646 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 GPR180Q86V85 440 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 CCDC13Q8IYE1 715 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 TRIM58Q8NG06 486 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 OR52I2Q8NH67 350 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 OR14L1PQ8NHC6 308 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 SLC38A5Q8WUX1 472 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 TAF15Q92804 592 aaKnown RBP eCLIP3.8□□□□□ -1.8
LINC00397-201ENST00000422074 ST6GAL2Q96JF0 529 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 TBATAQ96M53 351 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 LITAFQ99732 161 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 EIF2AK1Q9BQI3 630 aaKnown RBP3.8□□□□□ -1.8
LINC00397-201ENST00000422074 SCPEP1Q9HB40 452 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 PCDHB16Q9NRJ7 776 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 DLGAP2Q9P1A6 1054 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 KLHL20Q9Y2M5 609 aa3.8□□□□□ -1.8
LINC00397-201ENST00000422074 A0A1W2PQF6 199 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 NPIPB15A6NHN6 443 aaPredicted RBP3.79□□□□□ -1.8
LINC00397-201ENST00000422074 HS3ST1O14792 307 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 ANKRD28O15084 1053 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 RNF224P0DH78 156 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 ATP12AP54707 1039 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 RPL7AP62424 266 aaKnown RBP3.79□□□□□ -1.8
LINC00397-201ENST00000422074 PPIGQ13427 754 aaKnown RBP eCLIP3.79□□□□□ -1.8
LINC00397-201ENST00000422074 RAB6CQ53S08 254 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 OR7E24Q6IFN5 339 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 TSSK4Q6SA08 328 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 PLEKHM3Q6ZWE6 761 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 Q75L30 129 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 HEATR4Q86WZ0 1026 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 IL17REQ8NFR9 667 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 FAM149B1Q96BN6 582 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 RRP36Q96EU6 259 aaKnown RBP3.79□□□□□ -1.8
LINC00397-201ENST00000422074 MMABQ96EY8 250 aaPredicted RBP3.79□□□□□ -1.8
LINC00397-201ENST00000422074 RAB6CQ9H0N0 254 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 UBN1Q9NPG3 1134 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 SCRT2Q9NQ03 307 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 TCP11L1Q9NUJ3 509 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 MKLN1Q9UL63 735 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 ARHGAP26Q9UNA1 814 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 CAMK2AQ9UQM7 478 aa3.79□□□□□ -1.8
LINC00397-201ENST00000422074 PRAG1Q86YV5 1406 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 CCDC189A1A4V9 331 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 OR5K3A6NET4 321 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 C5orf60A6NFR6 353 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 A6NLC8 198 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 EIF3CLB5ME19 914 aaKnown RBP3.78□□□□□ -1.8
LINC00397-201ENST00000422074 SNAP23O00161 211 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 EIF3DO15371 548 aaKnown RBP eCLIP3.78□□□□□ -1.8
LINC00397-201ENST00000422074 PCDH7O60245 1069 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 CTSVO60911 334 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 DAB1O75553 588 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 LDLRP01130 860 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 SERPINB2P05120 415 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 OLR1P78380 273 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 ZBED6P86452 979 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 PLIN5Q00G26 463 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 DCTN2Q13561 401 aaKnown RBP3.78□□□□□ -1.8
LINC00397-201ENST00000422074 DPCR1Q3MIW9 517 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 MAP7D3Q8IWC1 876 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 PAF1Q8N7H5 531 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 CNBD1Q8NA66 436 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 OR10V1Q8NGI7 309 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 ZUFSPQ96AP4 578 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 INTS12Q96CB8 462 aaKnown RBP3.78□□□□□ -1.8
LINC00397-201ENST00000422074 LINGO1Q96FE5 620 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 SEPT5Q99719 369 aaPredicted RBP3.78□□□□□ -1.8
LINC00397-201ENST00000422074 PIP5K1AQ99755 562 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 GFRA4Q9GZZ7 299 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 SIL1Q9H173 461 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 JMJD4Q9H9V9 463 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 PREBQ9HCU5 417 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.78□□□□□ -1.8
LINC00397-201ENST00000422074 CNOT8Q9UFF9 292 aaKnown RBP3.78□□□□□ -1.8
LINC00397-201ENST00000422074 OR14J1Q9UGF5 321 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 FAF1Q9UNN5 650 aaPredicted RBP3.78□□□□□ -1.8
LINC00397-201ENST00000422074 TMEM98Q9Y2Y6 226 aa3.78□□□□□ -1.8
LINC00397-201ENST00000422074 TMEM184BQ9Y519 407 aaPredicted RBP3.78□□□□□ -1.8
LINC00397-201ENST00000422074 ARHGEF40Q8TER5 1519 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 CACNA1FO60840 1977 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 BLOC1S5-TXNDC5H3BN57 136 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 PDE9AO76083 593 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 NKX2-2O95096 273 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 BAG4O95429 457 aaKnown RBP3.77□□□□□ -1.81
LINC00397-201ENST00000422074 CSF2RAP15509 400 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 IL7RP16871 459 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 HARS2P49590 506 aaKnown RBP3.77□□□□□ -1.81
LINC00397-201ENST00000422074 PMP22Q01453 160 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 TMEM115Q12893 351 aaPredicted RBP3.77□□□□□ -1.81
LINC00397-201ENST00000422074 CSTF3Q12996 717 aaKnown RBP3.77□□□□□ -1.81
LINC00397-201ENST00000422074 ADIPOQQ15848 244 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 CEACAM20Q6UY09 585 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 RAD9BQ6WBX8 426 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 SLC38A9Q8NBW4 561 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 METTL6Q8TCB7 284 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 TAS1R2Q8TE23 839 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 SGCDQ92629 289 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 ARHGEF26Q96DR7 871 aa3.77□□□□□ -1.81
LINC00397-201ENST00000422074 ABHD8Q96I13 439 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms