RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Olfr183Q8VFB9 309 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Pycr2Q922Q4 320 aaKnown RBP18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Cnbd2Q9D5U8 673 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 IgtpQ9DCE9 423 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 ArntlQ9WTL8 632 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gm28363A0A087WQW2 129 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Slc6a21A0A1B0GSD2 748 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gm21964A0A1W2P7S4 437 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Mcf2A2AEU1 1111 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Rrn3B2RS91 656 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Zfr2E9Q5M4 874 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gm7073E9QAS1 335 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 CenpaO35216 134 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Odc1P00860 461 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Pou5f1P20263 352 aaKnown RBP18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Tuba1cP68373 449 aaKnown RBP18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Cd300lgQ1ERP8 331 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Cyp2c66Q5GLZ0 490 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Sdf4Q61112 361 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gpr141Q7TQP0 305 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Sgo2Q7TSY8 1164 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Sept11Q8C1B7 431 aaKnown RBP18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Slc5a9Q8VDT1 685 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Mob2Q8VI63 235 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Dhrs4Q99LB2 279 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 AasdhpptQ9CQF6 309 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Slco6d1Q9D5W6 683 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Ovca2Q9D7E3 225 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Slc28a3Q9ERH8 703 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Tuba8Q9JJZ2 449 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Smok1Q9QYZ4 484 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gsk3bQ9WV60 420 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Prr14lE9Q7C4 1971 aa18.63■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Fkbp7O54998 218 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Kcnk4O88454 398 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 WapP01173 134 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Eno2P17183 434 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gpx3P46412 226 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 IqcmQ149I8 489 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Parp3Q3ULW8 533 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Cntn2Q61330 1040 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Zfp90Q61967 636 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Pcbp2Q61990 362 aaKnown RBP18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 TsnQ62348 228 aaKnown RBP18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 DdnQ80TS7 710 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Morc4Q8BMD7 928 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Sfr1Q8BP27 319 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Clec1aQ8BWY2 269 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Rdh12Q8BYK4 316 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Nckap1lQ8K1X4 1134 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Lurap1lQ8K2P1 221 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Akr1c13Q8VC28 323 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Olfr589Q8VGV8 317 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 HnrnpabQ99020 285 aaKnown RBP18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Dctn2Q99KJ8 402 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Ankrd61Q9CQM6 421 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Wdr89Q9D0R9 386 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Pak1ip1Q9DCE5 382 aaKnown RBP18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 1810010D01RikA0A1L1SR87 51 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Pabpc4lG5E8X2 370 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Oaz2O08608 189 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gfra2O08842 464 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 BdnfP21237 249 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Hhla1Q3TYV2 514 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 LchnQ3UHG7 455 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gm4981Q3ULJ8 291 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Tmed1Q3V009 227 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Lrrc47Q505F5 581 aaKnown RBP18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Usp17laQ61068 526 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Slc13a5Q67BT3 572 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Rxfp4Q7TQP4 414 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Cyth4Q80YW0 393 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 FicdQ8BIX9 458 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Trmt2bQ8BQJ6 493 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Pdcd2lQ8C5N5 364 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 NlnQ91YP2 704 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Ptbp2Q91Z31 531 aaKnown RBP18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Dnaaf1Q9D2H9 634 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Pias4Q9JM05 507 aa18.62■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Rhox6O70238 227 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Tap1P21958 724 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gria2P23819 883 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 NogP97466 232 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Alg6Q3TAE8 507 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 XpaQ64267 272 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 DglucyQ8BH86 617 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Frmd4bQ920B0 1035 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Dph2Q9CR25 489 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Tmbim6Q9D2C7 237 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Bpifa3Q9D9J8 232 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Epb41l4bQ9JMC8 527 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Ighv11-2A0A075B5R8 117 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gm13941A2AJ38 245 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Gm3642K7N6V4 267 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 ArsaP50428 506 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 BmxP97504 651 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Tp53i13Q5F267 385 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Cox8aQ64445 69 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Dennd1cQ8CFK6 786 aa18.61■□□□□ 0.57
Shkbp1-201ENSMUST00000003857 Tp53bp2Q8CG79 1128 aa18.61■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms