Protein–RNA interactions for Protein: Q3TYV2

Hhla1, HERV-H LTR-associating protein 1 homolog, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hhla1Q3TYV2 Gm25239-201ENSMUST00000174915 86 ntBASIC42.65■■■■■ 4.42
Hhla1Q3TYV2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
Hhla1Q3TYV2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Hhla1Q3TYV2 Gm24109-201ENSMUST00000175489 103 ntBASIC37.07■■■■□ 3.52
Hhla1Q3TYV2 Gm15042-201ENSMUST00000120212 883 ntBASIC37.05■■■■□ 3.52
Hhla1Q3TYV2 Gm15045-201ENSMUST00000117359 883 ntBASIC36.2■■■■□ 3.39
Hhla1Q3TYV2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.04■■■■□ 3.36
Hhla1Q3TYV2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Hhla1Q3TYV2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Hhla1Q3TYV2 Gm23366-201ENSMUST00000175022 89 ntBASIC35.59■■■■□ 3.29
Hhla1Q3TYV2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Hhla1Q3TYV2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Hhla1Q3TYV2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Hhla1Q3TYV2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.63■■■■□ 3.13
Hhla1Q3TYV2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Hhla1Q3TYV2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.34■■■■□ 3.09
Hhla1Q3TYV2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
Hhla1Q3TYV2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.27■■■■□ 3.08
Hhla1Q3TYV2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Hhla1Q3TYV2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.17■■■■□ 3.06
Hhla1Q3TYV2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Hhla1Q3TYV2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Hhla1Q3TYV2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Hhla1Q3TYV2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Hhla1Q3TYV2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.76■■■□□ 2.99
Hhla1Q3TYV2 Gm25238-201ENSMUST00000174914 89 ntBASIC33.75■■■□□ 2.99
Hhla1Q3TYV2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.71■■■□□ 2.99
Hhla1Q3TYV2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Hhla1Q3TYV2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Hhla1Q3TYV2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Hhla1Q3TYV2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.3■■■□□ 2.92
Hhla1Q3TYV2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Hhla1Q3TYV2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.13■■■□□ 2.89
Hhla1Q3TYV2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.11■■■□□ 2.89
Hhla1Q3TYV2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Hhla1Q3TYV2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Hhla1Q3TYV2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
Hhla1Q3TYV2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.77■■■□□ 2.84
Hhla1Q3TYV2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Hhla1Q3TYV2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hhla1Q3TYV2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.7■■■□□ 2.83
Hhla1Q3TYV2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Hhla1Q3TYV2 Gm27325-201ENSMUST00000175467 74 ntBASIC32.44■■■□□ 2.78
Hhla1Q3TYV2 Gm25262-201ENSMUST00000174934 133 ntBASIC32.43■■■□□ 2.78
Hhla1Q3TYV2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.4■■■□□ 2.78
Hhla1Q3TYV2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.39■■■□□ 2.78
Hhla1Q3TYV2 Psd-208ENSMUST00000224556 2034 ntBASIC32.26■■■□□ 2.75
Hhla1Q3TYV2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Hhla1Q3TYV2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Hhla1Q3TYV2 Rab21-202ENSMUST00000218831 843 ntBASIC32■■■□□ 2.71
Hhla1Q3TYV2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.99■■■□□ 2.71
Hhla1Q3TYV2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Hhla1Q3TYV2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.93■■■□□ 2.7
Hhla1Q3TYV2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Hhla1Q3TYV2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.82■■■□□ 2.68
Hhla1Q3TYV2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Hhla1Q3TYV2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.79■■■□□ 2.68
Hhla1Q3TYV2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.79■■■□□ 2.68
Hhla1Q3TYV2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Hhla1Q3TYV2 Gm26115-201ENSMUST00000175605 87 ntBASIC31.71■■■□□ 2.67
Hhla1Q3TYV2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Hhla1Q3TYV2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Hhla1Q3TYV2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Hhla1Q3TYV2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.55■■■□□ 2.64
Hhla1Q3TYV2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.55■■■□□ 2.64
Hhla1Q3TYV2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Hhla1Q3TYV2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Hhla1Q3TYV2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Hhla1Q3TYV2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Hhla1Q3TYV2 Gm8109-201ENSMUST00000194076 746 ntBASIC31.49■■■□□ 2.63
Hhla1Q3TYV2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.43■■■□□ 2.62
Hhla1Q3TYV2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Hhla1Q3TYV2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.41■■■□□ 2.62
Hhla1Q3TYV2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.36■■■□□ 2.61
Hhla1Q3TYV2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Hhla1Q3TYV2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Hhla1Q3TYV2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Hhla1Q3TYV2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.28■■■□□ 2.6
Hhla1Q3TYV2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Hhla1Q3TYV2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Hhla1Q3TYV2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Hhla1Q3TYV2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Hhla1Q3TYV2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Hhla1Q3TYV2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Hhla1Q3TYV2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Hhla1Q3TYV2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Hhla1Q3TYV2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.01■■■□□ 2.55
Hhla1Q3TYV2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Hhla1Q3TYV2 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.9■■■□□ 2.54
Hhla1Q3TYV2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Hhla1Q3TYV2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.86■■■□□ 2.53
Hhla1Q3TYV2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Hhla1Q3TYV2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
Hhla1Q3TYV2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.79■■■□□ 2.52
Hhla1Q3TYV2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Hhla1Q3TYV2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Hhla1Q3TYV2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Hhla1Q3TYV2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Hhla1Q3TYV2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Hhla1Q3TYV2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.64■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms