Protein–RNA interactions for Protein: Q8BQJ6

Trmt2b, tRNA (uracil(54)-C(5))-methyltransferase homolog, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt2bQ8BQJ6 Gm25239-201ENSMUST00000174915 86 ntBASIC38.47■■■■□ 3.75
Trmt2bQ8BQJ6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
Trmt2bQ8BQJ6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Trmt2bQ8BQJ6 Gm15042-201ENSMUST00000120212 883 ntBASIC33.57■■■□□ 2.96
Trmt2bQ8BQJ6 Gm24109-201ENSMUST00000175489 103 ntBASIC33.32■■■□□ 2.92
Trmt2bQ8BQJ6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Trmt2bQ8BQJ6 Gm15045-201ENSMUST00000117359 883 ntBASIC32.76■■■□□ 2.83
Trmt2bQ8BQJ6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Trmt2bQ8BQJ6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Trmt2bQ8BQJ6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Trmt2bQ8BQJ6 Gm23366-201ENSMUST00000175022 89 ntBASIC32.17■■■□□ 2.74
Trmt2bQ8BQJ6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Trmt2bQ8BQJ6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Trmt2bQ8BQJ6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
Trmt2bQ8BQJ6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Trmt2bQ8BQJ6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.12■■■□□ 2.57
Trmt2bQ8BQJ6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Trmt2bQ8BQJ6 Psd-208ENSMUST00000224556 2034 ntBASIC31.01■■■□□ 2.55
Trmt2bQ8BQJ6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.87■■■□□ 2.53
Trmt2bQ8BQJ6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.84■■■□□ 2.53
Trmt2bQ8BQJ6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Trmt2bQ8BQJ6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Trmt2bQ8BQJ6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.75■■■□□ 2.51
Trmt2bQ8BQJ6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Trmt2bQ8BQJ6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Trmt2bQ8BQJ6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Trmt2bQ8BQJ6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Trmt2bQ8BQJ6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Trmt2bQ8BQJ6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Trmt2bQ8BQJ6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.46■■■□□ 2.47
Trmt2bQ8BQJ6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Trmt2bQ8BQJ6 Gm25238-201ENSMUST00000174914 89 ntBASIC30.36■■■□□ 2.45
Trmt2bQ8BQJ6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
Trmt2bQ8BQJ6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Trmt2bQ8BQJ6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Trmt2bQ8BQJ6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.17■■■□□ 2.42
Trmt2bQ8BQJ6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Trmt2bQ8BQJ6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trmt2bQ8BQJ6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
Trmt2bQ8BQJ6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Trmt2bQ8BQJ6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Trmt2bQ8BQJ6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.63■■■□□ 2.33
Trmt2bQ8BQJ6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Trmt2bQ8BQJ6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Trmt2bQ8BQJ6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Trmt2bQ8BQJ6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Trmt2bQ8BQJ6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.59■■■□□ 2.33
Trmt2bQ8BQJ6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.51■■■□□ 2.31
Trmt2bQ8BQJ6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
Trmt2bQ8BQJ6 Gm27325-201ENSMUST00000175467 74 ntBASIC29.39■■■□□ 2.3
Trmt2bQ8BQJ6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.31■■■□□ 2.28
Trmt2bQ8BQJ6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Trmt2bQ8BQJ6 Gm25262-201ENSMUST00000174934 133 ntBASIC29.2■■■□□ 2.26
Trmt2bQ8BQJ6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Trmt2bQ8BQJ6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Trmt2bQ8BQJ6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.09■■■□□ 2.25
Trmt2bQ8BQJ6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Trmt2bQ8BQJ6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Trmt2bQ8BQJ6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Trmt2bQ8BQJ6 Rab21-202ENSMUST00000218831 843 ntBASIC28.94■■■□□ 2.22
Trmt2bQ8BQJ6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.91■■■□□ 2.22
Trmt2bQ8BQJ6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Trmt2bQ8BQJ6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.87■■■□□ 2.21
Trmt2bQ8BQJ6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.77■■■□□ 2.2
Trmt2bQ8BQJ6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.75■■■□□ 2.19
Trmt2bQ8BQJ6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Trmt2bQ8BQJ6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Trmt2bQ8BQJ6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Trmt2bQ8BQJ6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Trmt2bQ8BQJ6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.64■■■□□ 2.18
Trmt2bQ8BQJ6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Trmt2bQ8BQJ6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.55■■■□□ 2.16
Trmt2bQ8BQJ6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Trmt2bQ8BQJ6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Trmt2bQ8BQJ6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Trmt2bQ8BQJ6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Trmt2bQ8BQJ6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Trmt2bQ8BQJ6 Gm26115-201ENSMUST00000175605 87 ntBASIC28.51■■■□□ 2.15
Trmt2bQ8BQJ6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.5■■■□□ 2.15
Trmt2bQ8BQJ6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.43■■■□□ 2.14
Trmt2bQ8BQJ6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Trmt2bQ8BQJ6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Trmt2bQ8BQJ6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Trmt2bQ8BQJ6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Trmt2bQ8BQJ6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Trmt2bQ8BQJ6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Trmt2bQ8BQJ6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Trmt2bQ8BQJ6 Gm8109-201ENSMUST00000194076 746 ntBASIC28.28■■■□□ 2.12
Trmt2bQ8BQJ6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trmt2bQ8BQJ6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trmt2bQ8BQJ6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.23■■■□□ 2.11
Trmt2bQ8BQJ6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.19■■■□□ 2.1
Trmt2bQ8BQJ6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trmt2bQ8BQJ6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Trmt2bQ8BQJ6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Trmt2bQ8BQJ6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Trmt2bQ8BQJ6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.11■■■□□ 2.09
Trmt2bQ8BQJ6 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.08■■■□□ 2.09
Trmt2bQ8BQJ6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Trmt2bQ8BQJ6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.04■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms