Protein–RNA interactions for Protein: A0A075B5R8

Ighv11-2, Immunoglobulin heavy variable V11-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv11-2A0A075B5R8 Gm25239-201ENSMUST00000174915 86 ntBASIC40,37■■■■■ 4,05
Ighv11-2A0A075B5R8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37,37■■■■□ 3,57
Ighv11-2A0A075B5R8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36,75■■■■□ 3,47
Ighv11-2A0A075B5R8 Gm15042-201ENSMUST00000120212 883 ntBASIC35,23■■■■□ 3,23
Ighv11-2A0A075B5R8 Gm24109-201ENSMUST00000175489 103 ntBASIC34,99■■■■□ 3,19
Ighv11-2A0A075B5R8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34,85■■■■□ 3,17
Ighv11-2A0A075B5R8 Gm15045-201ENSMUST00000117359 883 ntBASIC34,47■■■■□ 3,11
Ighv11-2A0A075B5R8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34,18■■■■□ 3,06
Ighv11-2A0A075B5R8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34,14■■■■□ 3,06
Ighv11-2A0A075B5R8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34,03■■■■□ 3,04
Ighv11-2A0A075B5R8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33,78■■■■□ 3
Ighv11-2A0A075B5R8 Gm23366-201ENSMUST00000175022 89 ntBASIC33,65■■■□□ 2,98
Ighv11-2A0A075B5R8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33,61■■■□□ 2,97
Ighv11-2A0A075B5R8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33,49■■■□□ 2,95
Ighv11-2A0A075B5R8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32,91■■■□□ 2,86
Ighv11-2A0A075B5R8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32,83■■■□□ 2,85
Ighv11-2A0A075B5R8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32,7■■■□□ 2,83
Ighv11-2A0A075B5R8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32,66■■■□□ 2,82
Ighv11-2A0A075B5R8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,57■■■□□ 2,8
Ighv11-2A0A075B5R8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32,51■■■□□ 2,79
Ighv11-2A0A075B5R8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32,47■■■□□ 2,79
Ighv11-2A0A075B5R8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32,46■■■□□ 2,79
Ighv11-2A0A075B5R8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32,28■■■□□ 2,76
Ighv11-2A0A075B5R8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,26■■■□□ 2,75
Ighv11-2A0A075B5R8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,25■■■□□ 2,75
Ighv11-2A0A075B5R8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32,12■■■□□ 2,73
Ighv11-2A0A075B5R8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32,11■■■□□ 2,73
Ighv11-2A0A075B5R8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32,08■■■□□ 2,73
Ighv11-2A0A075B5R8 Psd-208ENSMUST00000224556 2034 ntBASIC32,05■■■□□ 2,72
Ighv11-2A0A075B5R8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32,02■■■□□ 2,72
Ighv11-2A0A075B5R8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2,71
Ighv11-2A0A075B5R8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31,9■■■□□ 2,7
Ighv11-2A0A075B5R8 Gm25238-201ENSMUST00000174914 89 ntBASIC31,89■■■□□ 2,7
Ighv11-2A0A075B5R8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31,89■■■□□ 2,7
Ighv11-2A0A075B5R8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31,79■■■□□ 2,68
Ighv11-2A0A075B5R8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31,75■■■□□ 2,67
Ighv11-2A0A075B5R8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31,74■■■□□ 2,67
Ighv11-2A0A075B5R8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31,33■■■□□ 2,61
Ighv11-2A0A075B5R8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31,2■■■□□ 2,58
Ighv11-2A0A075B5R8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31,12■■■□□ 2,57
Ighv11-2A0A075B5R8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31,1■■■□□ 2,57
Ighv11-2A0A075B5R8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31,09■■■□□ 2,57
Ighv11-2A0A075B5R8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31,09■■■□□ 2,57
Ighv11-2A0A075B5R8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31,03■■■□□ 2,56
Ighv11-2A0A075B5R8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31■■■□□ 2,55
Ighv11-2A0A075B5R8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,92■■■□□ 2,54
Ighv11-2A0A075B5R8 Gm27325-201ENSMUST00000175467 74 ntBASIC30,85■■■□□ 2,53
Ighv11-2A0A075B5R8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
Ighv11-2A0A075B5R8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30,76■■■□□ 2,52
Ighv11-2A0A075B5R8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30,71■■■□□ 2,51
Ighv11-2A0A075B5R8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30,66■■■□□ 2,5
Ighv11-2A0A075B5R8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30,66■■■□□ 2,5
Ighv11-2A0A075B5R8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30,66■■■□□ 2,5
Ighv11-2A0A075B5R8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30,64■■■□□ 2,5
Ighv11-2A0A075B5R8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Ighv11-2A0A075B5R8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,47■■■□□ 2,47
Ighv11-2A0A075B5R8 Gm25262-201ENSMUST00000174934 133 ntBASIC30,47■■■□□ 2,47
Ighv11-2A0A075B5R8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30,41■■■□□ 2,46
Ighv11-2A0A075B5R8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,37■■■□□ 2,45
Ighv11-2A0A075B5R8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30,31■■■□□ 2,44
Ighv11-2A0A075B5R8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30,3■■■□□ 2,44
Ighv11-2A0A075B5R8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30,28■■■□□ 2,44
Ighv11-2A0A075B5R8 Rab21-202ENSMUST00000218831 843 ntBASIC30,28■■■□□ 2,44
Ighv11-2A0A075B5R8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30,19■■■□□ 2,42
Ighv11-2A0A075B5R8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,17■■■□□ 2,42
Ighv11-2A0A075B5R8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Ighv11-2A0A075B5R8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,06■■■□□ 2,4
Ighv11-2A0A075B5R8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30,02■■■□□ 2,4
Ighv11-2A0A075B5R8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30,01■■■□□ 2,39
Ighv11-2A0A075B5R8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30,01■■■□□ 2,39
Ighv11-2A0A075B5R8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29,97■■■□□ 2,39
Ighv11-2A0A075B5R8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29,96■■■□□ 2,39
Ighv11-2A0A075B5R8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29,96■■■□□ 2,39
Ighv11-2A0A075B5R8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29,96■■■□□ 2,39
Ighv11-2A0A075B5R8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29,95■■■□□ 2,39
Ighv11-2A0A075B5R8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Ighv11-2A0A075B5R8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Ighv11-2A0A075B5R8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29,93■■■□□ 2,38
Ighv11-2A0A075B5R8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29,92■■■□□ 2,38
Ighv11-2A0A075B5R8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29,91■■■□□ 2,38
Ighv11-2A0A075B5R8 Gm10524-201ENSMUST00000181931 1893 ntBASIC29,89■■■□□ 2,38
Ighv11-2A0A075B5R8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Ighv11-2A0A075B5R8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29,86■■■□□ 2,37
Ighv11-2A0A075B5R8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29,85■■■□□ 2,37
Ighv11-2A0A075B5R8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29,85■■■□□ 2,37
Ighv11-2A0A075B5R8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29,83■■■□□ 2,37
Ighv11-2A0A075B5R8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29,78■■■□□ 2,36
Ighv11-2A0A075B5R8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29,78■■■□□ 2,36
Ighv11-2A0A075B5R8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29,72■■■□□ 2,35
Ighv11-2A0A075B5R8 Gm26115-201ENSMUST00000175605 87 ntBASIC29,71■■■□□ 2,35
Ighv11-2A0A075B5R8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29,69■■■□□ 2,34
Ighv11-2A0A075B5R8 Gm42596-201ENSMUST00000196305 1958 ntBASIC29,68■■■□□ 2,34
Ighv11-2A0A075B5R8 Gm8109-201ENSMUST00000194076 746 ntBASIC29,65■■■□□ 2,34
Ighv11-2A0A075B5R8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
Ighv11-2A0A075B5R8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,62■■■□□ 2,33
Ighv11-2A0A075B5R8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Ighv11-2A0A075B5R8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29,56■■■□□ 2,32
Ighv11-2A0A075B5R8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29,53■■■□□ 2,32
Ighv11-2A0A075B5R8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29,48■■■□□ 2,31
Ighv11-2A0A075B5R8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,31
Retrieved 100 of 76,532 protein–RNA pairs in 11,8 ms