RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	S100Z	Q8WXG8	99 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	PEX13	Q92968	403 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	B3GALT6	Q96L58	329 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	DHRS9	Q9BPW9	319 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	DCUN1D5	Q9BTE7	237 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	DNMT3B	Q9UBC3	853 aa	Known RBP	10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	TLK1	Q9UKI8	766 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	PCDHGB4	Q9UN71	923 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	PCDHGB5	Q9Y5G0	923 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	PLXND1	Q9Y4D7	1925 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	USP34	Q70CQ2	3546 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	SDHD	O14521	159 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	PRKAA2	P54646	552 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	TPTE	P56180	551 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	SPCS2	Q15005	226 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	TIGD2	Q4W5G0	525 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	ZNF789	Q5FWF6	425 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	NADSYN1	Q6IA69	706 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	DCP1B	Q8IZD4	617 aa	Known RBP	10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	TXNDC5	Q8NBS9	432 aa	Known RBP	10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	CHPT1	Q8WUD6	406 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	CEP41	Q9BYV8	373 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	NEK6	Q9HC98	313 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	MID2	Q9UJV3	735 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	ARHGEF15	O94989	841 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	CHRNG	P07510	517 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	SPATA31D3	P0C874	917 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	SLC26A3	P40879	764 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	SCNN1G	P51170	649 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	FAM219B	Q5XKK7	198 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	PRR23B	Q6ZRT6	265 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	RNF165	Q6ZSG1	346 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	SPATA31D4	Q6ZUB0	917 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	RTL3	Q8N8U3	475 aa	Known RBP	10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	ISG20	Q96AZ6	181 aa	Known RBP	10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	VPS39	Q96JC1	886 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	GLT1D1	Q96MS3	346 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	EFHD1	Q9BUP0	239 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	TRPV6	Q9H1D0	765 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	CRISPLD1	Q9H336	500 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	PCDH12	Q9NPG4	1184 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	PIH1D1	Q9NWS0	290 aa	Known RBP	10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	OR12D3	Q9UGF7	316 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	CNOT11	Q9UKZ1	510 aa	Known RBP	10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	POMP	Q9Y244	141 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	DNAJC16	Q9Y2G8	782 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	PCDHGA7	Q9Y5G6	932 aa		10.87	□□□□□ -0.67
ILF3-208	ENST00000587928	AQP9	O43315	295 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	GSN	P06396	782 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	TYK2	P29597	1187 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	SERPINB5	P36952	375 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	MAGEA11	P43364	429 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	TAGLN	Q01995	201 aa	Known RBP	10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	RASGRP3	Q8IV61	690 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	ATP6V0D2	Q8N8Y2	350 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	UROC1	Q96N76	676 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	CAB39L	Q9H9S4	337 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	SLC2A6	Q9UGQ3	507 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	PCDHB8	Q9UN66	801 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	C1orf232	A0A0U1RR37	186 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	PSMD11	O00231	422 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	SLC7A4	O43246	635 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	MYO1D	O94832	1006 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	KLHL2	O95198	593 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	POMC	P01189	267 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	ITIH1	P19827	911 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	PGGT1B	P53609	377 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	TGFBI	Q15582	683 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	LIPM	Q5VYY2	423 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	HACD2	Q6Y1H2	254 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	VASH1	Q7L8A9	365 aa	Predicted RBP	10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	OTOP3	Q7RTS5	596 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	ZFP28	Q8NHY6	868 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	MOCOS	Q96EN8	888 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	RMND5B	Q96G75	393 aa	Predicted RBP	10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	TTLL2	Q9BWV7	592 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	IKZF3	Q9UKT9	509 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	B3GNT3	Q9Y2A9	372 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	TLR6	Q9Y2C9	796 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	ZFC3H1	O60293	1989 aa	Known RBP	10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	MUSK	O15146	869 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	FGF10	O15520	208 aa	Predicted RBP	10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	TSPAN12	O95859	305 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	ATF6	P18850	670 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	SLC1A2	P43004	574 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	ARPP19	P56211	112 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	SEMA3A	Q14563	771 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	PAN2	Q504Q3	1202 aa	Known RBP	10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	SFT2D3	Q587I9	215 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	OVOS1	Q6IE37	1185 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	LARP4	Q71RC2	724 aa	Known RBP eCLIP	10.86	□□□□□ -0.67	7e-9	■□□□□ 9
ILF3-208	ENST00000587928	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	SCAMP5	Q8TAC9	235 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	GLOD4	Q9HC38	313 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	TBC1D13	Q9NVG8	400 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	MARCH5	Q9NX47	278 aa		10.86	□□□□□ -0.67
ILF3-208	ENST00000587928	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	10.85	□□□□□ -0.67
ILF3-208	ENST00000587928	KCNK1	O00180	336 aa		10.85	□□□□□ -0.67
ILF3-208	ENST00000587928	CABYR	O75952	493 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 70 ms