RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 EPOP01588 193 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 FGF1P05230 155 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 GPR89BP0CG08 455 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 ADCY8P40145 1251 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 CD86P42081 329 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 COPS2P61201 443 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 ZFP36L1Q07352 338 aaKnown RBP11.05□□□□□ -0.64
NR1H3-230ENST00000527949 AP1B1Q10567 949 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 PYCR3Q53H96 274 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 DENND2CQ68D51 928 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 FOXR1Q6PIV2 292 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 SPOCD1Q6ZMY3 1216 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 SPRED1Q7Z699 444 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 RFX6Q8HWS3 928 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 TMTC1Q8IUR5 882 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 LPCAT1Q8NF37 534 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 SCAMP4Q969E2 229 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 RBM41Q96IZ5 413 aaKnown RBP11.05□□□□□ -0.64
NR1H3-230ENST00000527949 TEKT5Q96M29 485 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 OR2M4Q96R27 311 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 WDR24Q96S15 920 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 DPYSL5Q9BPU6 564 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 RIOK2Q9BVS4 552 aaKnown RBP11.05□□□□□ -0.64
NR1H3-230ENST00000527949 FAM83DQ9H4H8 585 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 GLOD4Q9HC38 313 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 TAAR2Q9P1P5 351 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 SIRPGQ9P1W8 387 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 RABGEF1Q9UJ41 708 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.05□□□□□ -0.64
NR1H3-230ENST00000527949 TTLL3Q9Y4R7 772 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 PCDHA13Q9Y5I0 950 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 SCN8AQ9UQD0 1980 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 hCG_1818297A0A087WSY0 165 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 C1orf232A0A0U1RR37 186 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 SUV39H1O43463 412 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 PPFIA2O75334 1257 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 CLDN7O95471 211 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 NDST3O95803 873 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 RPLP0P05388 317 aaKnown RBP11.04□□□□□ -0.64
NR1H3-230ENST00000527949 PTPN3P26045 913 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 PTPN7P35236 360 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 NOP2P46087 812 aaKnown RBP11.04□□□□□ -0.64
NR1H3-230ENST00000527949 CLCNKAP51800 687 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 ZNF75DP51815 510 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 CCL7P80098 99 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 B4GALNT1Q00973 533 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 CTBSQ01459 385 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 CDK18Q07002 472 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 XRCC4Q13426 336 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 PTPRRQ15256 657 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 COLEC12Q5KU26 742 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 RFLNAQ6ZTI6 216 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 BBS12Q6ZW61 710 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 TMC3Q7Z5M5 1100 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 FBXO39Q8N4B4 442 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 EXD3Q8N9H8 876 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 AVL9Q8NBF6 648 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 CCL4L1Q8NHW4 92 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 ZDHHC1Q8WTX9 485 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 TFB1MQ8WVM0 346 aaKnown RBP11.04□□□□□ -0.64
NR1H3-230ENST00000527949 RNF25Q96BH1 459 aaPredicted RBP11.04□□□□□ -0.64
NR1H3-230ENST00000527949 DPEP2Q9H4A9 486 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 TRABDQ9H4I3 376 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 ZFYVE1Q9HBF4 777 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 SPATS2LQ9NUQ6 558 aaKnown RBP11.04□□□□□ -0.64
NR1H3-230ENST00000527949 LRIT1Q9P2V4 623 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 CNOT6Q9ULM6 557 aaKnown RBP11.04□□□□□ -0.64
NR1H3-230ENST00000527949 PCDHB11Q9Y5F2 797 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 EPN1Q9Y6I3 576 aaPredicted RBP11.04□□□□□ -0.64
NR1H3-230ENST00000527949 RNF215Q9Y6U7 377 aa11.04□□□□□ -0.64
NR1H3-230ENST00000527949 LOC285095A0A1B0GVY8 99 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 B4DGG1 531 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 PYCARD-AS1I3L0S3 204 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 NVLO15381 856 aaKnown RBP11.03□□□□□ -0.64
NR1H3-230ENST00000527949 CST8O60676 142 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 DNAJC6O75061 913 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 NDUFA10O95299 355 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 IPO7O95373 1038 aaKnown RBP11.03□□□□□ -0.64
NR1H3-230ENST00000527949 CPNE6O95741 557 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 LIPCP11150 499 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 GNPDA1P46926 289 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 FASLGP48023 281 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 WASHC5Q12768 1159 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 TRA2AQ13595 282 aaKnown RBP eCLIP11.03□□□□□ -0.64
NR1H3-230ENST00000527949 ZDHHC20Q5W0Z9 365 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 NPNTQ6UXI9 565 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 RAB11FIP2Q7L804 512 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 GALNT13Q8IUC8 556 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 SLITRK4Q8IW52 837 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 NAGSQ8N159 534 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 UBE2Q2Q8WVN8 375 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 P3H4Q92791 437 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 AGAP3Q96P47 875 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 QKIQ96PU8 341 aaKnown RBP eCLIP11.03□□□□□ -0.64
NR1H3-230ENST00000527949 SMIM14Q96QK8 99 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 FCRL5Q96RD9 977 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 ZSCAN5AQ9BUG6 496 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 CARD9Q9H257 536 aa11.03□□□□□ -0.64
NR1H3-230ENST00000527949 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms