RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 NT5DC3Q86UY8 548 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 GPR180Q86V85 440 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 SATL1Q86VE3 508 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 LNX2Q8N448 690 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 FXYD6Q9H0Q3 95 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ILVBLA1L0T0 632 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF705FA8MVS1 300 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ADAMTS3O15072 1205 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 SLC22A1O15245 554 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CREBL2O60519 120 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 FADS2O95864 444 aaKnown RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF705DP0CH99 300 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF705BP0CI00 300 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ALADP13716 330 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 GLP1RP43220 463 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 MASP1P48740 699 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 GUK1Q16774 197 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF517Q6ZMY9 492 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 STAP2Q9UGK3 403 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 DNM1LO00429 736 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 TBX3O15119 743 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ATP6V1G1O75348 118 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 RBL1P28749 1068 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 DNASE1L3Q13609 305 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 RRP1BQ14684 758 aaKnown RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 VWA5B1Q5TIE3 1220 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 BEND4Q6ZU67 534 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CHSY3Q70JA7 882 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CAND1Q86VP6 1230 aaKnown RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 BEND7Q8N7W2 519 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 GOLM1Q8NBJ4 401 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CAVIN3Q969G5 261 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 BTF3L4Q96K17 158 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 SNTG1Q9NSN8 517 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZFP57Q9NU63 452 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ARMC1Q9NVT9 282 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 KCNE2Q9Y6J6 123 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 CDHR2Q9BYE9 1310 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 C2orf78A6NCI8 922 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 FBP2O00757 339 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 KHNYNO15037 678 aaKnown RBP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 OTCP00480 354 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 LTFP02788 710 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 PPP5CP53041 499 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 DEFA6Q01524 100 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 EPHA7Q15375 998 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.91□□□□□ -0.98
NIPBL-202ENST00000448238 IQCF1Q8N6M8 205 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ZFP3Q96NJ6 502 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 SLC4A5Q9BY07 1137 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 RNF38Q9H0F5 515 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 SAGE1Q9NXZ1 904 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 BARHL2Q9NY43 387 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 ACAD8Q9UKU7 415 aa8.91□□□□□ -0.98
NIPBL-202ENST00000448238 FANCD2Q9BXW9 1451 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ITPKAP23677 461 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 CCR1P32246 355 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 GBX2P52951 348 aaPredicted RBP8.9□□□□□ -0.98
NIPBL-202ENST00000448238 TLR1Q15399 786 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 FAM153CQ494X1 144 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 RNASE12Q5GAN4 147 aaKnown RBP8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ADAMTSL2Q86TH1 951 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ECHDC2Q86YB7 292 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 SLC30A8Q8IWU4 369 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 TMEM203Q969S6 136 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 MFSD3Q96ES6 412 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ZSWIM1Q9BR11 485 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF358Q9NW07 568 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 GABBR2O75899 941 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 LHX1P48742 406 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 MAN2A2P49641 1150 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 MC1RQ01726 317 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF45Q02386 682 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ZDHHC17Q8IUH5 632 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 TRAPPC5Q8IUR0 188 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 OR2AJ1Q8NGZ0 328 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ITFG2Q969R8 447 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF512BQ96KM6 892 aaPredicted RBP8.9□□□□□ -0.98
NIPBL-202ENST00000448238 MAT2BQ9NZL9 334 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 RPL36Q9Y3U8 105 aaKnown RBP8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ASTN2O75129 1339 aaPredicted RBP8.9□□□□□ -0.98
NIPBL-202ENST00000448238 A0A0G2JN53 185 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 HACD1B0YJ81 288 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 RAMP2O60895 175 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 CPNE3O75131 537 aaKnown RBP8.9□□□□□ -0.98
NIPBL-202ENST00000448238 MBL2P11226 248 aaPredicted RBP8.9□□□□□ -0.98
NIPBL-202ENST00000448238 IGFBP5P24593 272 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 HTR1BP28222 390 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ALDH3B1P43353 468 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 CDK3Q00526 305 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 CREMQ03060 361 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 PKP1Q13835 747 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 PIWIL4Q7Z3Z4 852 aaKnown RBP8.9□□□□□ -0.98
NIPBL-202ENST00000448238 ESX1Q8N693 406 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 KATNBL1Q9H079 304 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 TOR3AQ9H497 397 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 RAVER2Q9HCJ3 691 aaKnown RBP8.9□□□□□ -0.98
NIPBL-202ENST00000448238 PPP1R14DQ9NXH3 145 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 DPP3Q9NY33 737 aa8.9□□□□□ -0.98
NIPBL-202ENST00000448238 CYP2C18P33260 490 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms