RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CTNNA2P26232 953 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 WNT3AP56704 352 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 NOMO1Q15155 1222 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 AADACL2Q6P093 401 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 SPRED1Q7Z699 444 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 NAGSQ8N159 534 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 SPC24Q8NBT2 197 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 ALG3Q92685 438 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 CRELD1Q96HD1 420 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 OXNAD1Q96HP4 312 aaPredicted RBP17.57■□□□□ 0.4
LSM5-204ENST00000409909 CDH19Q9H159 772 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 ASCL3Q9NQ33 180 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 TRIM10Q9UDY6 481 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 FAM153AQ9UHL3 310 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 PRKAB1Q9Y478 270 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 B4GAT1O43505 415 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ASMTLO95671 621 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 CDC25BP30305 580 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ACTR1BP42025 376 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ACTR1AP61163 376 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 B4GALNT1Q00973 533 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 XRCC4Q13426 336 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ALS2CLQ60I27 953 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 PID1Q7Z2X4 250 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ZNF438Q7Z4V0 828 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 GALNT13Q8IUC8 556 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 LSMEM2Q8N112 164 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ARL14Q8N4G2 192 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 MRGPRX2Q96LB1 330 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ZNF578Q96N58 590 aaPredicted RBP17.56■□□□□ 0.4
LSM5-204ENST00000409909 FCRL5Q96RD9 977 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 VAT1Q99536 393 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 DESI2Q9BSY9 194 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 OSBPL8Q9BZF1 889 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 GPR63Q9BZJ6 419 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 FOXP3Q9BZS1 431 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ARFGAP3Q9NP61 516 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 VPS18Q9P253 973 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 KLHL8Q9P2G9 620 aaPredicted RBP17.56■□□□□ 0.4
LSM5-204ENST00000409909 IMPACTQ9P2X3 320 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ZNHIT2Q9UHR6 403 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ATXN7L1Q9ULK2 861 aaPredicted RBP17.56■□□□□ 0.4
LSM5-204ENST00000409909 EFR3BQ9Y2G0 817 aa17.56■□□□□ 0.4
LSM5-204ENST00000409909 ZFC3H1O60293 1989 aaKnown RBP17.56■□□□□ 0.4
LSM5-204ENST00000409909 PTPRQQ9UMZ3 2332 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 CCDC66A2RUB6 948 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 SLC4A1P02730 911 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 PYGMP11217 842 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 BPIP17213 487 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 RBL1P28749 1068 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 PTPN7P35236 360 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 CHRNA4P43681 627 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 RWDD2BP57060 319 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 DCDC1P59894 354 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 OTUD4Q01804 1114 aaKnown RBP17.55■□□□□ 0.4
LSM5-204ENST00000409909 SIRPB2Q5JXA9 342 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 ZNF648Q5T619 568 aaPredicted RBP17.55■□□□□ 0.4
LSM5-204ENST00000409909 CCDC70Q6NSX1 233 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 IGF2-ASQ6U949 168 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 TMPRSS9Q7Z410 1059 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 KIAA1328Q86T90 577 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 ACTL9Q8TC94 416 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 SLC46A1Q96NT5 459 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 FAM118BQ9BPY3 351 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 SPATA16Q9BXB7 569 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 TRHDEQ9UKU6 1024 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 PCDHGA8Q9Y5G5 932 aa17.55■□□□□ 0.4
LSM5-204ENST00000409909 CCDC187A0A096LP49 1063 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 H7C0C1 242 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 PPM1DO15297 605 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 EML2O95834 649 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 EPOP01588 193 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 ATP5OP48047 213 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 OR1D5P58170 312 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 ERVPABLB-1P60509 514 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 CCDC173Q0VFZ6 552 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 LRP8Q14114 963 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 FOXR1Q6PIV2 292 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 PDZD3Q86UT5 571 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 SLC25A41Q8N5S1 370 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 WDR36Q8NI36 951 aaKnown RBP17.54■□□□□ 0.4
LSM5-204ENST00000409909 LIN37Q96GY3 246 aaPredicted RBP17.54■□□□□ 0.4
LSM5-204ENST00000409909 GORASP1Q9BQQ3 440 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 ZSCAN5AQ9BUG6 496 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 EPB41L5Q9HCM4 733 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 BPIFA1Q9NP55 256 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 ATXN10Q9UBB4 475 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 NFKBIL1Q9UBC1 381 aaPredicted RBP17.54■□□□□ 0.4
LSM5-204ENST00000409909 CACNA1GO43497 2377 aa17.54■□□□□ 0.4
LSM5-204ENST00000409909 SMG1Q96Q15 3661 aaKnown RBP17.53■□□□□ 0.4
LSM5-204ENST00000409909 SCN8AQ9UQD0 1980 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 MACROD2A1Z1Q3 448 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 RHPN2P1A8MT19 583 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 RRP8O43159 456 aaKnown RBP17.53■□□□□ 0.4
LSM5-204ENST00000409909 NUAK1O60285 661 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 ABCG1P45844 678 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 INHBCP55103 352 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 ZFP36L1Q07352 338 aaKnown RBP17.53■□□□□ 0.4
LSM5-204ENST00000409909 NR1D2Q14995 579 aa17.53■□□□□ 0.4
LSM5-204ENST00000409909 CCDC181Q5TID7 509 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms