RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 DGKQP52824 942 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 CDKL1Q00532 357 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 KRT33BQ14525 404 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 TARBP2Q15633 366 aaKnown RBP13.84□□□□□ -0.19
COL6A1-201ENST00000361866 FBXL19Q6PCT2 694 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 SLC47A1Q96FL8 570 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 MED8Q96G25 268 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 NODALQ96S42 347 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 SORT1Q99523 831 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 SLC29A1Q99808 456 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 TPK1Q9H3S4 243 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 TLR8Q9NR97 1041 aaKnown RBP13.84□□□□□ -0.19
COL6A1-201ENST00000361866 EHD3Q9NZN3 535 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 EBF1Q9UH73 591 aa13.84□□□□□ -0.19
COL6A1-201ENST00000361866 KNL1Q8NG31 2342 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 PHRF1Q9P1Y6 1649 aaKnown RBP13.83□□□□□ -0.19
COL6A1-201ENST00000361866 PRORSD1PA6NEY8 169 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 MATN3O15232 486 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 CAPN1P07384 714 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 IL7RP16871 459 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 IL4RP24394 825 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 CCNCP24863 283 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 GSK3BP49841 420 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 DIO3P55073 304 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 LAPTM5Q13571 262 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 KLHL35Q6PF15 583 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 ATAD1Q8NBU5 361 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 STYXQ8WUJ0 223 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 PDLIM7Q9NR12 457 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 SUCOQ9UBS9 1254 aaKnown RBP13.83□□□□□ -0.19
COL6A1-201ENST00000361866 PCDHB5Q9Y5E4 795 aa13.83□□□□□ -0.19
COL6A1-201ENST00000361866 CLDN25C9JDP6 229 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 E9PAM4 449 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 HOXB8P17481 243 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-201ENST00000361866 TKTP29401 623 aaKnown RBP13.83□□□□□ -0.2
COL6A1-201ENST00000361866 MC4RP32245 332 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 IFNA8P32881 189 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 TPTEP56180 551 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 EPS8Q12929 822 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 INAQ16352 499 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 CEP97Q8IW35 865 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 HM13Q8TCT9 377 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 RAET1EQ8TD07 263 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 MAGEL2Q9UJ55 1249 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 EMCNQ9ULC0 261 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 PDE10AQ9Y233 779 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 PCDHGC4Q9Y5F7 938 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 PHLPP1O60346 1717 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 H3BN98 237 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 FAM189A1O60320 539 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 ONECUT3O60422 494 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-201ENST00000361866 CYP3A5P20815 502 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 MRPL28Q13084 256 aaKnown RBP13.83□□□□□ -0.2
COL6A1-201ENST00000361866 CRY1Q16526 586 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 PAQR3Q6TCH7 311 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 AHSA2Q719I0 299 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 SYT12Q8IV01 421 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 ROPN1LQ96C74 230 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 PLEKHA8Q96JA3 519 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 GALPQ9UBC7 116 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 BTBD3Q9Y2F9 522 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 ARL5AQ9Y689 179 aa13.83□□□□□ -0.2
COL6A1-201ENST00000361866 BEST1O76090 585 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 SLC10A7Q0GE19 358 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 INCA1Q0VD86 236 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 ARMCX4Q5H9R4 360 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 KIAA0408Q6ZU52 694 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 CPNE9Q8IYJ1 553 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 HMCESQ96FZ2 354 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 SH3BP1Q9Y3L3 701 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 PTCH2Q9Y6C5 1203 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 SNPHO15079 494 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 SLC35E2BP0CK96 405 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 HSPA7P48741 367 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 PIGFQ07326 219 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 HERC3Q15034 1050 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 ZNF423Q2M1K9 1284 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 TYW3Q6IPR3 259 aaKnown RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 AMER2Q8N7J2 671 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 PPTC7Q8NI37 304 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 ISOC1Q96CN7 298 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 FAM126AQ9BYI3 521 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 RRAGCQ9HB90 399 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 CIDEBQ9UHD4 219 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 NUMBLQ9Y6R0 609 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 LRRC14BA6NHZ5 514 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 ENPP3O14638 875 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 SNAP29O95721 258 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 PGK1P00558 417 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 TFAP2AP05549 437 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 GSTM1P09488 218 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 ALOX15P16050 662 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 PRKACGP22612 351 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 CHI3L1P36222 383 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 NNMTP40261 264 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 MAD2L1Q13257 205 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 FAM187BQ17R55 369 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 ZNF549Q6P9A3 640 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms