RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Syn3Q8JZP2 579 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Glis1Q8K1M4 789 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gprc5bQ923Z0 410 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Mccc1Q99MR8 717 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Mrpl57Q9CQF8 102 aaKnown RBP11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 MsraQ9D6Y7 233 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Spatc1lQ9D9W0 342 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Mkrn2Q9ERV1 416 aaKnown RBP11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Ptk2bQ9QVP9 1009 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Ddx39bQ9Z1N5 428 aaKnown RBP11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Rhox3cA2AWM0 215 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Pdzd7E9Q9W7 1021 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gm6408J3QNG1 320 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gm3402K7N5P2 326 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Rhox3hL7MU37 215 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Olfr603L7N1Y4 312 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 EsrraO08580 422 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Galnt1O08912 559 aaKnown RBP11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Usp2O88623 613 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Aldh3a1P47739 453 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Rhox3aQ4TU90 215 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Xlr3aQ60595 226 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 ProcrQ64695 242 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Scd4Q6T707 353 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Tmem169Q8BG50 297 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Fbxw8Q8BIA4 598 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Plin5Q8BVZ1 463 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Asb14Q8C6Y6 587 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Lin52Q8CD94 116 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Lurap1lQ8K2P1 221 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 D8Ertd738eQ8R1F0 94 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 TbccQ8VCN9 341 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Psip1Q99JF8 528 aaKnown RBP11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Aco2Q99KI0 780 aaKnown RBP11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Kbtbd12Q9D618 625 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ropn1Q9ESG2 212 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Cacng3Q9JJV5 315 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Cyhr1Q9QXA1 311 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Actl7bQ9QY83 418 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Shcbp1Q9Z179 668 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Arid3bQ9Z1N7 568 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ern2Q9Z2E3 911 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Wdr49A0A0N4SUK7 710 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gm42688A0A0R3P9D1 673 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 4931406B18RikA2RSL7 367 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gm3259D3YUK0 475 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Adamts14E9PX39 1209 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Cyp4f17G3UW78 524 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Man2b1O09159 1013 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Fgf10O35565 209 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 AvilO88398 819 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Oas1aP11928 367 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Casp2P29594 452 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Plin2P43883 425 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Matn1P51942 500 aaKnown RBP11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Kpna2P52293 529 aaKnown RBP11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 GemP55041 295 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 HmgcrQ01237 887 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ccdc61Q3UJV1 511 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ssx9Q6XAS3 170 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Slc39a4Q78IQ7 660 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Olfr26Q7TRB7 308 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Phf24Q80TL4 400 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Pnma8aQ80VM8 430 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Btbd10Q80X66 475 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Rcn2Q8BP92 320 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Clptm1lQ8BXA5 539 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ccdc142Q8CAI1 738 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Oas1gQ8K469 367 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ttc4Q8R3H9 386 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 SarafQ8R3Q0 334 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ccdc58Q8R3Q6 144 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Setd7Q8VHL1 366 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Kctd4Q9D7X1 259 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Atp5oQ9DB20 213 aaKnown RBP11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ccdc22Q9JIG7 627 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Scube2Q9JJS0 997 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Dnajb2Q9QYI5 324 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Fkbp1bQ9Z2I2 108 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Slc8a3S4R2P9 928 aa11.33□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ptrhd1D3Z4S3 140 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Dnajb5O89114 348 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Hoxb1P17919 297 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Il12bP43432 335 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Slc26a1P58735 704 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Sash1P59808 1230 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Tmem207P86045 143 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Eif2ak2Q03963 515 aaKnown RBP11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Bpifa6Q0VGU8 367 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ulk3Q3U3Q1 472 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Fam83fQ3UKU4 495 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 CfiQ61129 603 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Znf280cQ6P3Y5 742 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Tigd3Q7TM95 470 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Far2Q7TNT2 515 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Olfr1062Q7TR71 315 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Lrrc27Q80YS5 523 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Edem2Q8BJT9 577 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Palm2Q8BR92 376 aa11.32□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Acot4Q8BWN8 421 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms