Protein–RNA interactions for Protein: Q78IQ7

Slc39a4, Zinc transporter ZIP4, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc39a4Q78IQ7 Gm25239-201ENSMUST00000174915 86 ntBASIC39.05■■■■□ 3.84
Slc39a4Q78IQ7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Slc39a4Q78IQ7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Slc39a4Q78IQ7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Slc39a4Q78IQ7 Gm15042-201ENSMUST00000120212 883 ntBASIC34.25■■■■□ 3.07
Slc39a4Q78IQ7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Slc39a4Q78IQ7 Gm24109-201ENSMUST00000175489 103 ntBASIC33.78■■■■□ 3
Slc39a4Q78IQ7 Gm15045-201ENSMUST00000117359 883 ntBASIC33.56■■■□□ 2.96
Slc39a4Q78IQ7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.37■■■□□ 2.93
Slc39a4Q78IQ7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Slc39a4Q78IQ7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Slc39a4Q78IQ7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Slc39a4Q78IQ7 Gm23366-201ENSMUST00000175022 89 ntBASIC32.59■■■□□ 2.81
Slc39a4Q78IQ7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Slc39a4Q78IQ7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Slc39a4Q78IQ7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.14■■■□□ 2.74
Slc39a4Q78IQ7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Slc39a4Q78IQ7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Slc39a4Q78IQ7 Psd-208ENSMUST00000224556 2034 ntBASIC31.88■■■□□ 2.69
Slc39a4Q78IQ7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Slc39a4Q78IQ7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Slc39a4Q78IQ7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Slc39a4Q78IQ7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Slc39a4Q78IQ7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Slc39a4Q78IQ7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
Slc39a4Q78IQ7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Slc39a4Q78IQ7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.47■■■□□ 2.63
Slc39a4Q78IQ7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.38■■■□□ 2.61
Slc39a4Q78IQ7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Slc39a4Q78IQ7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.3■■■□□ 2.6
Slc39a4Q78IQ7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.03■■■□□ 2.56
Slc39a4Q78IQ7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Slc39a4Q78IQ7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Slc39a4Q78IQ7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Slc39a4Q78IQ7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Slc39a4Q78IQ7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.87■■■□□ 2.53
Slc39a4Q78IQ7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Slc39a4Q78IQ7 Gm25238-201ENSMUST00000174914 89 ntBASIC30.8■■■□□ 2.52
Slc39a4Q78IQ7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Slc39a4Q78IQ7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.67■■■□□ 2.5
Slc39a4Q78IQ7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Slc39a4Q78IQ7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Slc39a4Q78IQ7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Slc39a4Q78IQ7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Slc39a4Q78IQ7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.26■■■□□ 2.43
Slc39a4Q78IQ7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Slc39a4Q78IQ7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Slc39a4Q78IQ7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.12■■■□□ 2.41
Slc39a4Q78IQ7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
Slc39a4Q78IQ7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.11■■■□□ 2.41
Slc39a4Q78IQ7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Slc39a4Q78IQ7 Gm27325-201ENSMUST00000175467 74 ntBASIC30.06■■■□□ 2.4
Slc39a4Q78IQ7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Slc39a4Q78IQ7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Slc39a4Q78IQ7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Slc39a4Q78IQ7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Slc39a4Q78IQ7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.78■■■□□ 2.36
Slc39a4Q78IQ7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.76■■■□□ 2.36
Slc39a4Q78IQ7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Slc39a4Q78IQ7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Slc39a4Q78IQ7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.71■■■□□ 2.35
Slc39a4Q78IQ7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Slc39a4Q78IQ7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
Slc39a4Q78IQ7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.62■■■□□ 2.33
Slc39a4Q78IQ7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Slc39a4Q78IQ7 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.61■■■□□ 2.33
Slc39a4Q78IQ7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Slc39a4Q78IQ7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Slc39a4Q78IQ7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
Slc39a4Q78IQ7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Slc39a4Q78IQ7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Slc39a4Q78IQ7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
Slc39a4Q78IQ7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Slc39a4Q78IQ7 Rab21-202ENSMUST00000218831 843 ntBASIC29.38■■■□□ 2.29
Slc39a4Q78IQ7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Slc39a4Q78IQ7 Gm25262-201ENSMUST00000174934 133 ntBASIC29.34■■■□□ 2.29
Slc39a4Q78IQ7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.28■■■□□ 2.28
Slc39a4Q78IQ7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.28■■■□□ 2.28
Slc39a4Q78IQ7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.26■■■□□ 2.27
Slc39a4Q78IQ7 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.25■■■□□ 2.27
Slc39a4Q78IQ7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Slc39a4Q78IQ7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Slc39a4Q78IQ7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
Slc39a4Q78IQ7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Slc39a4Q78IQ7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Slc39a4Q78IQ7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.07■■■□□ 2.24
Slc39a4Q78IQ7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Slc39a4Q78IQ7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Slc39a4Q78IQ7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Slc39a4Q78IQ7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Slc39a4Q78IQ7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.95■■■□□ 2.22
Slc39a4Q78IQ7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Slc39a4Q78IQ7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Slc39a4Q78IQ7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Slc39a4Q78IQ7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Slc39a4Q78IQ7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.81■■■□□ 2.2
Slc39a4Q78IQ7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Slc39a4Q78IQ7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Slc39a4Q78IQ7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.74■■■□□ 2.19
Slc39a4Q78IQ7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 110.6 ms