RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 PrnpP04925 254 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Smpd1Q04519 627 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Nudt18Q3U2V3 323 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 G2e3Q5RJY2 716 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr667Q7TRP4 326 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Disc1Q811T9 852 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Csnk1g3Q8C4X2 424 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Adgrg3Q8R0T6 542 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 HnrnprQ8VHM5 632 aaKnown RBP8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Copg1Q9QZE5 874 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pate3B3GLJ3 98 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr220E9Q050 325 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vmn2r2L7N2E9 908 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Il4i1O09046 630 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Grpel2O88396 224 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 CkmP07310 381 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Hoxc8P09025 242 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Sbk3P0C5K0 361 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Epb42P49222 691 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ncf4P97369 339 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 TceancQ3US16 359 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Armcx5Q3UZB0 606 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 PdgfrlQ6PE55 375 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 ItpkcQ7TS72 678 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Usp1Q8BJQ2 784 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Camk1dQ8BW96 385 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pcdhgb1Q91XX8 918 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pramel1Q99MW3 458 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Prl7c1Q9CRB5 251 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Q9D1F3 157 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cyp4f14Q9EP75 524 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fgf22Q9ESS2 162 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ppp2r3cQ9JK24 453 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Dio2Q9Z1Y9 266 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Prpmp5E9PXN1 296 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zc3h12bG3X9I7 835 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Neurod4O09105 330 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Angpt2O35608 496 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 LatO54957 242 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Slc22a2O70577 553 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Sstr3P30935 428 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cct8P42932 548 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mxd1P50538 227 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 AcadsQ07417 412 aaKnown RBP8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Arl5aQ80ZU0 179 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Noc4lQ8BHY2 516 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Efcab1Q9D3N2 212 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cyp4v2Q9DBW0 525 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rab13Q9DD03 202 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Galk1Q9R0N0 392 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fibcd1A2AV25 459 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Nlrp12E9Q5R7 1054 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Znf683I7HJS4 458 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 LtfP08071 707 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 HmbsP22907 361 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ldb1P70662 411 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Aqp1Q02013 269 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cd163Q2VLH6 1121 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cntn2Q61330 1040 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vwa2Q70UZ7 791 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr538Q7TRT5 310 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rdh13Q8CEE7 334 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Slc30a5Q8R4H9 761 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mrps33Q9D2R8 106 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Tchhl1Q9D3P1 638 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Dnajb4Q9D832 337 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Xrn2Q9DBR1 951 aaKnown RBP8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cdh17Q9R100 827 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cdh13Q9WTR5 714 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pcsk6F6XJP7 959 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vmn2r10K7N621 847 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 KizQ3UXL4 695 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rassf5Q5EBH1 413 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 PtprrQ62132 656 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Smpd4Q6ZPR5 823 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 BicralQ8CHH5 1074 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Actr8Q8R2S9 624 aaKnown RBP8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rnh1Q91VI7 456 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Atp6v1b1Q91YH6 513 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mta3Q924K8 591 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gpc1Q9QZF2 557 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vmn1r3A2AMT7 306 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Nipsnap3aB1AWZ3 247 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Anxa6P14824 673 aaKnown RBP8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Hsd3b5Q61694 373 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Scube1Q6NZL8 1018 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr26Q7TRB7 308 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vmn1r188Q8K3N2 308 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vmn1r79Q8R285 306 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr693Q8VF89 316 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cers2Q924Z4 380 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr933Q9EQA0 308 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 B9d1Q9R1S0 204 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm12800B1AUV4 484 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm12794L7MTS5 483 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vmn2r57L7N269 863 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Adcy1O88444 1118 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cdh2P15116 906 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Aqp4P55088 323 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Usp46P62069 366 aa8.44□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms