RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 XRCC4Q13426 336 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 SLC14A2Q15849 920 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 KDELC1Q6UW63 502 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 MARK2Q7KZI7 788 aaKnown RBP14.4□□□□□ -0.1
PDAP1-204ENST00000496335 PEX26Q7Z412 305 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 CACTIN-AS1Q8N1I8 211 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 GPBAR1Q8TDU6 330 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 NAT6Q93015 286 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 OXNAD1Q96HP4 312 aaPredicted RBP14.4□□□□□ -0.1
PDAP1-204ENST00000496335 HIC2Q96JB3 615 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 CCDC3Q9BQI4 270 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 DPEP2Q9H4A9 486 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 ZFYVE1Q9HBF4 777 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 MAGEE1Q9HCI5 957 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 SPATS2LQ9NUQ6 558 aaKnown RBP14.4□□□□□ -0.1
PDAP1-204ENST00000496335 PKD2L2Q9NZM6 624 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 FAM153AQ9UHL3 310 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 RABGEF1Q9UJ41 708 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 CNOT6Q9ULM6 557 aaKnown RBP14.4□□□□□ -0.1
PDAP1-204ENST00000496335 EFR3BQ9Y2G0 817 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 ZNF711Q9Y462 761 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 PLEKHM1Q9Y4G2 1056 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 SPO11Q9Y5K1 396 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 ST14Q9Y5Y6 855 aa14.4□□□□□ -0.1
PDAP1-204ENST00000496335 CHD6Q8TD26 2715 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 FADS2P1A8MWK0 482 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 B4DGG1 531 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 AURKAO14965 403 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 NOBOXO60393 691 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 CSO75390 466 aaKnown RBP14.39□□□□□ -0.11
PDAP1-204ENST00000496335 ATP1A1P05023 1023 aaKnown RBP14.39□□□□□ -0.11
PDAP1-204ENST00000496335 IVLP07476 585 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 PTPN7P35236 360 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 ADCY8P40145 1251 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 CHRNA4P43681 627 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 WNT3AP56704 352 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 EIF3EP60228 445 aaKnown RBP14.39□□□□□ -0.11
PDAP1-204ENST00000496335 CTBSQ01459 385 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 HENMT1Q5T8I9 393 aaKnown RBP14.39□□□□□ -0.11
PDAP1-204ENST00000496335 ALS2CLQ60I27 953 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 CCDC70Q6NSX1 233 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 OGFOD3Q6PK18 319 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 TMC3Q7Z5M5 1100 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 RAVER1Q8IY67 606 aaKnown RBP14.39□□□□□ -0.11
PDAP1-204ENST00000496335 SYCE1Q8N0S2 351 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 SLC25A41Q8N5S1 370 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 GPR26Q8NDV2 337 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 GPR156Q8NFN8 814 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 CCDC74AQ96AQ1 378 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 SCARF2Q96GP6 870 aaPredicted RBP14.39□□□□□ -0.11
PDAP1-204ENST00000496335 COX14Q96I36 57 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 MRGPRX2Q96LB1 330 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 DEPDC7Q96QD5 511 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 FCRL5Q96RD9 977 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 VAT1Q99536 393 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 GPR63Q9BZJ6 419 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 TRNAU1APQ9NX07 287 aaKnown RBP14.39□□□□□ -0.11
PDAP1-204ENST00000496335 DKK4Q9UBT3 224 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 RSPH14Q9UHP6 348 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 RAXQ9Y2V3 346 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 GPSM3Q9Y4H4 160 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 OAS3Q9Y6K5 1087 aaKnown RBP14.39□□□□□ -0.11
PDAP1-204ENST00000496335 AK5Q9Y6K8 562 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 CAPN6Q9Y6Q1 641 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 SCN8AQ9UQD0 1980 aa14.39□□□□□ -0.11
PDAP1-204ENST00000496335 LOC285095A0A1B0GVY8 99 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 RGSL1A5PLK6 1076 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 DDX3YO15523 660 aaKnown RBP14.38□□□□□ -0.11
PDAP1-204ENST00000496335 ASMTLO95671 621 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 PYGLP06737 847 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 RBP3P10745 1247 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 CETN2P41208 172 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 GSDMDP57764 484 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 ILF3Q12906 894 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDAP1-204ENST00000496335 PYCR3Q53H96 274 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 DARS2Q6PI48 645 aaKnown RBP14.38□□□□□ -0.11
PDAP1-204ENST00000496335 SLC30A9Q6PML9 568 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 TXLNBQ8N3L3 684 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 UBL4BQ8N7F7 174 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 IPMKQ8NFU5 416 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 NXPE2Q96DL1 559 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 GORASP1Q9BQQ3 440 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 GSDMCQ9BYG8 508 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 NRSN2Q9GZP1 204 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 SYNDIG1Q9H7V2 258 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 ARFGAP3Q9NP61 516 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 TAAR2Q9P1P5 351 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 TRHDEQ9UKU6 1024 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 PRKAB1Q9Y478 270 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 PCYT1BQ9Y5K3 369 aaPredicted RBP14.38□□□□□ -0.11
PDAP1-204ENST00000496335 ADGRG1Q9Y653 693 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 LAMA5O15230 3695 aa14.38□□□□□ -0.11
PDAP1-204ENST00000496335 MIF4GDA9UHW6 222 aaKnown RBP14.37□□□□□ -0.11
PDAP1-204ENST00000496335 USP12O75317 370 aa14.37□□□□□ -0.11
PDAP1-204ENST00000496335 TJP3O95049 919 aa14.37□□□□□ -0.11
PDAP1-204ENST00000496335 FGF1P05230 155 aa14.37□□□□□ -0.11
PDAP1-204ENST00000496335 BPIP17213 487 aa14.37□□□□□ -0.11
PDAP1-204ENST00000496335 MAZP56270 477 aaKnown RBP14.37□□□□□ -0.11
PDAP1-204ENST00000496335 CCL7P80098 99 aa14.37□□□□□ -0.11
PDAP1-204ENST00000496335 RTP5Q14D33 572 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms