RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 SPATA3Q8NHX4 192 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 CD101Q93033 1021 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 FAM149B1Q96BN6 582 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 INPP4AQ96PE3 977 aaPredicted RBP4.06□□□□□ -1.76
LINC00888-204ENST00000487386 PCYT2Q99447 389 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 CMKLR1Q99788 373 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 SLC26A6Q9BXS9 759 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 PDCL3Q9H2J4 239 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 UNC45AQ9H3U1 944 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 PLEKHA5Q9HAU0 1116 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 SEBOXQ9HB31 216 aaPredicted RBP4.06□□□□□ -1.76
LINC00888-204ENST00000487386 FBRSL1Q9HCM7 1045 aaKnown RBP4.06□□□□□ -1.76
LINC00888-204ENST00000487386 ACSS1Q9NUB1 689 aaPredicted RBP4.06□□□□□ -1.76
LINC00888-204ENST00000487386 DLGAP2Q9P1A6 1054 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 PADI1Q9ULC6 663 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 PCDHAC2Q9Y5I4 1007 aa4.06□□□□□ -1.76
LINC00888-204ENST00000487386 A0A1W2PS18 150 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 B4E171 279 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 J3KRW8 73 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 SPINT2O43291 252 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 NKX2-2O95096 273 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 EGFP01133 1207 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 IGKV3-20P01619 116 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 UMODP07911 640 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 CDH1P12830 882 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 PBX3P40426 434 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 USP8P40818 1118 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 TSPAN7P41732 249 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 PDE1BQ01064 536 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 CEBPZQ03701 1054 aaKnown RBP4.05□□□□□ -1.76
LINC00888-204ENST00000487386 CDONQ4KMG0 1287 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 MEX3BQ6ZN04 569 aaKnown RBP4.05□□□□□ -1.76
LINC00888-204ENST00000487386 KMT5CQ86Y97 462 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.05□□□□□ -1.76
LINC00888-204ENST00000487386 SRBD1Q8N5C6 995 aaKnown RBP4.05□□□□□ -1.76
LINC00888-204ENST00000487386 KCNH5Q8NCM2 988 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 ETNPPLQ8TBG4 499 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 KCNG4Q8TDN1 519 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 APBB2Q92870 758 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 TAAR8Q969N4 342 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 ORAI1Q96D31 301 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 RRNAD1Q96FB5 475 aaKnown RBP4.05□□□□□ -1.76
LINC00888-204ENST00000487386 CDCA5Q96FF9 252 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 C7orf26Q96N11 449 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 MTERF1Q99551 399 aaKnown RBP4.05□□□□□ -1.76
LINC00888-204ENST00000487386 PCGF1Q9BSM1 259 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 RALYQ9UKM9 306 aaKnown RBP4.05□□□□□ -1.76
LINC00888-204ENST00000487386 PADI3Q9ULW8 664 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 ADAM18Q9Y3Q7 739 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 KIF21AQ7Z4S6 1674 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 BIVM-ERCC5R4GMW8 1640 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 SYNJ1O43426 1573 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 LAMC3Q9Y6N6 1575 aa4.05□□□□□ -1.76
LINC00888-204ENST00000487386 ASPDHA6ND91 283 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 XPNPEP2O43895 674 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 SPARCP09486 303 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 MYOD1P15172 320 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 ITGA2P17301 1181 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 PSMA4P25789 261 aaKnown RBP4.04□□□□□ -1.76
LINC00888-204ENST00000487386 APOBEC1P41238 236 aaKnown RBP4.04□□□□□ -1.76
LINC00888-204ENST00000487386 F2RL1P55085 397 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 TAS2R38P59533 333 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 FOXM1Q08050 763 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 CSTF3Q12996 717 aaKnown RBP4.04□□□□□ -1.76
LINC00888-204ENST00000487386 FRG1Q14331 258 aaKnown RBP4.04□□□□□ -1.76
LINC00888-204ENST00000487386 TBCEQ15813 527 aaPredicted RBP4.04□□□□□ -1.76
LINC00888-204ENST00000487386 GPATCH4Q5T3I0 446 aaKnown RBP4.04□□□□□ -1.76
LINC00888-204ENST00000487386 CYP20A1Q6UW02 462 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 TMTC3Q6ZXV5 915 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 USP43Q70EL4 1123 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 DSG4Q86SJ6 1040 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 MAB21L3Q8N8X9 362 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 KBTBD3Q8NAB2 608 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 OR5R1Q8NH85 324 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 BBS10Q8TAM1 723 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 SMARCE1Q969G3 411 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 FEM1CQ96JP0 617 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 HARBI1Q96MB7 349 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 NODALQ96S42 347 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 POLR1BQ9H9Y6 1135 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 SDF2L1Q9HCN8 221 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 POU2F3Q9UKI9 436 aa4.04□□□□□ -1.76
LINC00888-204ENST00000487386 A0A0B4J293 547 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 JRKO75564 520 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 KRT10P13645 584 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 UBA1P22314 1058 aaKnown RBP4.03□□□□□ -1.76
LINC00888-204ENST00000487386 KRT9P35527 623 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 RPS3AP61247 264 aaKnown RBP4.03□□□□□ -1.76
LINC00888-204ENST00000487386 ACSM2AQ08AH3 577 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 DCST1Q5T197 706 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 C18orf63Q68DL7 685 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 LCN10Q6JVE6 187 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 CCDC70Q6NSX1 233 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 DSTYKQ6XUX3 929 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 ASB18Q6ZVZ8 466 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 CIARTQ8N365 385 aaPredicted RBP4.03□□□□□ -1.76
LINC00888-204ENST00000487386 TDRD7Q8NHU6 1098 aaKnown RBP4.03□□□□□ -1.76
LINC00888-204ENST00000487386 HMGCLL1Q8TB92 370 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 THAP6Q8TBB0 222 aa4.03□□□□□ -1.76
LINC00888-204ENST00000487386 PIGTQ969N2 578 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms