RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Sgo2Q7TSY8 1164 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Ssh3Q8K330 649 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Ces2aQ8QZR3 558 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Sdccag3A2AIW0 432 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Gm8922F6XVS9 199 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 AldoaP05064 364 aaKnown RBP8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Fdft1P53798 416 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Lrrn4P59383 733 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Polr2lP62876 67 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Sephs2P97364 452 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Q14AM7 275 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Ntrk1Q3UFB7 799 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Snx21Q3UR97 363 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Cep295nlQ497N6 533 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Trim67Q505D9 768 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Grb10Q60760 621 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Dusp16Q6PCP3 660 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Ifi44Q8BV66 422 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Fam126bQ8C729 530 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Sgip1Q8VD37 806 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Snx7Q9CY18 387 aa8.46□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Gm3147A0A0J9YU88 481 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm10424A0A0J9YVD0 481 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Slc4a5E9Q3M5 1116 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm7971J3QMM8 481 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Galnt1O08912 559 aaKnown RBP8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 OmdO35103 423 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Slc6a20bO88575 635 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ptger1P35375 405 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cd9P40240 226 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Dsc2P55292 902 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mpp1P70290 466 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gpr15Q0VDU3 360 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Nr6a1Q64249 495 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 SvopQ8BFT9 548 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rbms3Q8BWL5 431 aaKnown RBP8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 HnrnplQ8R081 586 aaKnown RBP8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Nae1Q8VBW6 534 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Slc6a20aQ8VDB9 592 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rhobtb1Q9DAK3 695 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vmn1r65Q9EPS7 332 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Trip11E9Q512 1976 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ms4a4aA0A087WRT7 236 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm6509A0A0J9YUV1 481 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 1700001O22RikA2APZ1 375 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zyg11aA2BFL2 627 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Tcp10cE9Q046 482 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm6351K9J7D1 481 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Per3O70361 1113 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Dync1i2O88487 612 aaKnown RBP8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Dpy19l2P0CW70 773 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Hbq1bQ3U0A6 142 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Adrbk2Q3UYH7 688 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ddx5Q61656 614 aaKnown RBP8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Atp2c1Q80XR2 918 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cnksr3Q8BMA3 555 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zfp57Q8C6P8 421 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Itfg1Q99KW9 610 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Scd3Q99PL7 359 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rnf146Q9CZW6 359 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Exoc2Q9D4H1 924 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Glod5Q9D8I3 148 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Il22bQ9JJY8 179 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Wdr54Q9R0D8 334 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Smchd1Q6P5D8 2007 aaKnown RBP8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Skint7A7XV04 395 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rrn3B2RS91 656 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 CenplQ3U3S3 329 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Trim75Q3UWZ0 467 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ahi1Q8K3E5 1047 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Lims2Q91XD2 341 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Dpy30Q99LT0 99 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Spg21Q9CQC8 308 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ndufs3Q9DCT2 263 aaKnown RBP8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Jam2Q9JI59 298 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Abhd1Q9QZC8 412 aa8.46□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Glipr1l3A0A1W2P7V2 236 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mup6A2AV72 179 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 OgdhlE9Q7L0 1029 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Kcng2F7A6P6 480 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Hs3st1O35310 311 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cyp2c37P56654 490 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Kcnk9Q3LS21 402 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ulk3Q3U3Q1 472 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Htr1aQ64264 421 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Slc46a2Q8CA03 479 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pitrm1Q8K411 1036 aaKnown RBP8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Psmb9P28076 219 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 LcorlQ3U285 600 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 DbhQ64237 622 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Szrd1Q6NXN1 152 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Lrrc27Q80YS5 523 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Thoc5Q8BKT7 683 aaKnown RBP8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Trpv3Q8K424 791 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Dok4Q99KE3 325 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Capn15Q9JLG8 1095 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Psma4Q9R1P0 261 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Trim12cD3Z3L3 497 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 JhyE9Q793 770 aa8.45□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Edil3O35474 480 aa8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms