Protein–RNA interactions for Protein: A0A0J9YUV1

Gm6509, Predicted gene 6509, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6509A0A0J9YUV1 Gm25239-201ENSMUST00000174915 86 ntBASIC35.17■■■■□ 3.22
Gm6509A0A0J9YUV1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Gm6509A0A0J9YUV1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Gm6509A0A0J9YUV1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
Gm6509A0A0J9YUV1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Gm6509A0A0J9YUV1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Gm6509A0A0J9YUV1 Psd-208ENSMUST00000224556 2034 ntBASIC31.57■■■□□ 2.64
Gm6509A0A0J9YUV1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Gm6509A0A0J9YUV1 Gm15042-201ENSMUST00000120212 883 ntBASIC31.03■■■□□ 2.56
Gm6509A0A0J9YUV1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Gm6509A0A0J9YUV1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Gm6509A0A0J9YUV1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Gm6509A0A0J9YUV1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Gm6509A0A0J9YUV1 Gm15045-201ENSMUST00000117359 883 ntBASIC30.39■■■□□ 2.46
Gm6509A0A0J9YUV1 Gm24109-201ENSMUST00000175489 103 ntBASIC30.35■■■□□ 2.45
Gm6509A0A0J9YUV1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Gm6509A0A0J9YUV1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.2■■■□□ 2.43
Gm6509A0A0J9YUV1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Gm6509A0A0J9YUV1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Gm6509A0A0J9YUV1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Gm6509A0A0J9YUV1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Gm6509A0A0J9YUV1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Gm6509A0A0J9YUV1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Gm6509A0A0J9YUV1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Gm6509A0A0J9YUV1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Gm6509A0A0J9YUV1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Gm6509A0A0J9YUV1 Gm23366-201ENSMUST00000175022 89 ntBASIC29.41■■■□□ 2.3
Gm6509A0A0J9YUV1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Gm6509A0A0J9YUV1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Gm6509A0A0J9YUV1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Gm6509A0A0J9YUV1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Gm6509A0A0J9YUV1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.29■■■□□ 2.28
Gm6509A0A0J9YUV1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Gm6509A0A0J9YUV1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Gm6509A0A0J9YUV1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Gm6509A0A0J9YUV1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Gm6509A0A0J9YUV1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.11■■■□□ 2.25
Gm6509A0A0J9YUV1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Gm6509A0A0J9YUV1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Gm6509A0A0J9YUV1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Gm6509A0A0J9YUV1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Gm6509A0A0J9YUV1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Gm6509A0A0J9YUV1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.87■■■□□ 2.21
Gm6509A0A0J9YUV1 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.64■■■□□ 2.18
Gm6509A0A0J9YUV1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Gm6509A0A0J9YUV1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.58■■■□□ 2.17
Gm6509A0A0J9YUV1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Gm6509A0A0J9YUV1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Gm6509A0A0J9YUV1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.47■■■□□ 2.15
Gm6509A0A0J9YUV1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Gm6509A0A0J9YUV1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Gm6509A0A0J9YUV1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.32■■■□□ 2.12
Gm6509A0A0J9YUV1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Gm6509A0A0J9YUV1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.09■■■□□ 2.09
Gm6509A0A0J9YUV1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Gm6509A0A0J9YUV1 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.02■■■□□ 2.08
Gm6509A0A0J9YUV1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Gm6509A0A0J9YUV1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Gm6509A0A0J9YUV1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Gm6509A0A0J9YUV1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Gm6509A0A0J9YUV1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Gm6509A0A0J9YUV1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.88■■■□□ 2.05
Gm6509A0A0J9YUV1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Gm6509A0A0J9YUV1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Gm6509A0A0J9YUV1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Gm6509A0A0J9YUV1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.84■■■□□ 2.05
Gm6509A0A0J9YUV1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Gm6509A0A0J9YUV1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Gm6509A0A0J9YUV1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Gm6509A0A0J9YUV1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Gm6509A0A0J9YUV1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Gm6509A0A0J9YUV1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
Gm6509A0A0J9YUV1 Gm25238-201ENSMUST00000174914 89 ntBASIC27.67■■■□□ 2.02
Gm6509A0A0J9YUV1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Gm6509A0A0J9YUV1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.6■■■□□ 2.01
Gm6509A0A0J9YUV1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Gm6509A0A0J9YUV1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Gm6509A0A0J9YUV1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.54■■■□□ 2
Gm6509A0A0J9YUV1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Gm6509A0A0J9YUV1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.52■■■□□ 2
Gm6509A0A0J9YUV1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.44■■□□□ 1.98
Gm6509A0A0J9YUV1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Gm6509A0A0J9YUV1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Gm6509A0A0J9YUV1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Gm6509A0A0J9YUV1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Gm6509A0A0J9YUV1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Gm6509A0A0J9YUV1 Gm27325-201ENSMUST00000175467 74 ntBASIC27.23■■□□□ 1.95
Gm6509A0A0J9YUV1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Gm6509A0A0J9YUV1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
Gm6509A0A0J9YUV1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Gm6509A0A0J9YUV1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.19■■□□□ 1.94
Gm6509A0A0J9YUV1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Gm6509A0A0J9YUV1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Gm6509A0A0J9YUV1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.15■■□□□ 1.94
Gm6509A0A0J9YUV1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
Gm6509A0A0J9YUV1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Gm6509A0A0J9YUV1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Gm6509A0A0J9YUV1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Gm6509A0A0J9YUV1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Gm6509A0A0J9YUV1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 115.8 ms