RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 SULF1Q8IWU6 871 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SNX29Q8TEQ0 813 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SSC4DQ8WTU2 575 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 GATAD2BQ8WXI9 593 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ALG14Q96F25 216 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MS4A3Q96HJ5 214 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZFRQ96KR1 1074 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ACAP3Q96P50 834 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 UIMC1Q96RL1 719 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TSPAN18Q96SJ8 248 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MMP19Q99542 508 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 GFI1Q99684 422 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MFRPQ9BY79 579 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CXXC4Q9H2H0 198 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MMADHCQ9H3L0 296 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZBTB26Q9HCK0 441 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 IL23AQ9NPF7 189 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DLL4Q9NR61 685 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CATSPERZQ9NTU4 200 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DNAJC28Q9NX36 388 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC25A37Q9NYZ2 338 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SENP1Q9P0U3 644 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 STRIP2Q9ULQ0 834 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MGAT4AQ9UM21 535 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGAP26Q9UNA1 814 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC27A5Q9Y2P5 690 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCDHB9Q9Y5E1 797 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCDHA9Q9Y5H5 950 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 OR51B4Q9Y5P0 310 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC4A7Q9Y6M7 1214 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MED12LQ86YW9 2145 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 EPOPA6NHQ4 379 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 TTC34A8MYJ7 566 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADM5C9JUS6 153 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 CYB561D2O14569 222 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 GABRDO14764 452 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 PSMD3O43242 534 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 HBP1O60381 514 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 DIAPH2O60879 1101 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 AP1G2O75843 785 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 ECEL1O95672 775 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 HNRNPCP07910 306 aaKnown RBP eCLIP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 YES1P07947 543 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 TROVE2P10155 538 aaKnown RBP eCLIP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 TGFB3P10600 412 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 HOXB3P14651 431 aaPredicted RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 EN2P19622 333 aaPredicted RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 ABCD1P33897 745 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 STAT6P42226 847 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 PER3P56645 1201 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTMR3Q13615 1198 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 AGERQ15109 404 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 FSCN1Q16658 493 aaKnown RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 HADHQ16836 314 aaKnown RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM187BQ17R55 369 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 UBXN11Q5T124 520 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARMC3Q5W041 872 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF280DQ6N043 979 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZCCHC8Q6NZY4 707 aaKnown RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 ABHD15Q6UXT9 468 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 HSDL2Q6YN16 418 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM91Q6ZNR0 172 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 LARP4Q71RC2 724 aaKnown RBP eCLIP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 PHF13Q86YI8 300 aaPredicted RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAP4K3Q8IVH8 894 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 SCUBE3Q8IX30 993 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 RBM12BQ8IXT5 1001 aaKnown RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 CMTR2Q8IYT2 770 aaKnown RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARMC10Q8N2F6 343 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 UBL4BQ8N7F7 174 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 ULK4Q96C45 1275 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 RMND5BQ96G75 393 aaPredicted RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 DHRS1Q96LJ7 313 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 MLPHQ9BV36 600 aaPredicted RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCDH18Q9HCL0 1135 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 VTA1Q9NP79 307 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 KLHL1Q9NR64 748 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 UBA2Q9UBT2 640 aaPredicted RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 ASIC3Q9UHC3 531 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 AMACRQ9UHK6 382 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCDHGC3Q9UN70 934 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 SCAF8Q9UPN6 1271 aaKnown RBP1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRR14LQ5THK1 2151 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 CACNA1DQ01668 2161 aa1.65□□□□□ -2.14
TRAPPC13-211ENST00000512009 TLDC2A0PJX2 215 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRORSD1PA6NEY8 169 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L5A8MUK1 530 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 B2RBV5 119 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 C2CD4DB7Z1M9 353 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 RTCAO00442 366 aaKnown RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 NRP1O14786 923 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 N4BP3O15049 544 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC26A4O43511 780 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPOPO43791 374 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 SORBS3O60504 671 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 STX11O75558 287 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 PALMO75781 387 aa1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 RNASEH2AO75792 299 aaKnown RBP1.65□□□□□ -2.15
TRAPPC13-211ENST00000512009 SCO1O75880 301 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms