RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 FSD1Q9BTV5 496 aa4□□□□□ -1.77
SMC4-219ENST00000487747 PLEKHA4Q9H4M7 779 aa4□□□□□ -1.77
SMC4-219ENST00000487747 PADI3Q9ULW8 664 aa4□□□□□ -1.77
SMC4-219ENST00000487747 KCNK7Q9Y2U2 307 aa4□□□□□ -1.77
SMC4-219ENST00000487747 IRAK2O43187 625 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 TSPAN3O60637 253 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 TFP02787 698 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 ARL4CP56559 192 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 ZNF766Q5HY98 468 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 FBXO47Q5MNV8 452 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 MAP3K21Q5TCX8 1036 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 ZC2HC1BQ5TFG8 222 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 ATG16L1Q676U5 607 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 BBS12Q6ZW61 710 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 HAPLN4Q86UW8 402 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 PCDH20Q8N6Y1 951 aaKnown RBP3.99□□□□□ -1.77
SMC4-219ENST00000487747 ADAD2Q8NCV1 583 aaKnown RBP3.99□□□□□ -1.77
SMC4-219ENST00000487747 PIGTQ969N2 578 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 GRAMD2BQ96HH9 432 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 ZNF354BQ96LW1 612 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 ZNF599Q96NL3 588 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 FAM118AQ9NWS6 357 aa3.99□□□□□ -1.77
SMC4-219ENST00000487747 TTC7AQ9ULT0 858 aaPredicted RBP3.99□□□□□ -1.77
SMC4-219ENST00000487747 COL2A1P02458 1487 aaPredicted RBP3.98□□□□□ -1.77
SMC4-219ENST00000487747 CRLF1O75462 422 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 RRM1P23921 792 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 KRT2P35908 639 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 CCR5P51681 352 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 RAD23BP54727 409 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 DRG2P55039 364 aaKnown RBP3.98□□□□□ -1.77
SMC4-219ENST00000487747 GNB1P62873 340 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 EFR3AQ14156 821 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 ZNF234Q14588 700 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 NFIL3Q16649 462 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 HIST2H2ACQ16777 129 aaPredicted RBP3.98□□□□□ -1.77
SMC4-219ENST00000487747 WDR38Q5JTN6 314 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 METTL2BQ6P1Q9 378 aaKnown RBP3.98□□□□□ -1.77
SMC4-219ENST00000487747 SLC22A25Q6T423 547 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 ATF7IPQ6VMQ6 1270 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.98□□□□□ -1.77
SMC4-219ENST00000487747 CNBD1Q8NA66 436 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 C11orf65Q8NCR3 313 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 ZNF248Q8NDW4 579 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 ACVR1CQ8NER5 493 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 CADM4Q8NFZ8 388 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 OR52I2Q8NH67 350 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 METTL2AQ96IZ6 378 aaKnown RBP3.98□□□□□ -1.77
SMC4-219ENST00000487747 NEUROD6Q96NK8 337 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 PYM1Q9BRP8 204 aaKnown RBP3.98□□□□□ -1.77
SMC4-219ENST00000487747 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 SEBOXQ9HB31 216 aaPredicted RBP3.98□□□□□ -1.77
SMC4-219ENST00000487747 PCDHGB3Q9Y5G1 929 aa3.98□□□□□ -1.77
SMC4-219ENST00000487747 GOLGA6L10A0A0M3HER8 536 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 CCDC194A0A1B0GVG4 234 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 NBNO60934 754 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 RNF224P0DH78 156 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 KRT5P13647 590 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 DDX5P17844 614 aaKnown RBP3.97□□□□□ -1.77
SMC4-219ENST00000487747 HOXA1P49639 335 aaPredicted RBP3.97□□□□□ -1.77
SMC4-219ENST00000487747 CDH15P55291 814 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 RPL24P83731 157 aaKnown RBP3.97□□□□□ -1.77
SMC4-219ENST00000487747 RUNX1T1Q06455 604 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 NAE1Q13564 534 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 CCNYL2Q5T2Q4 361 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 GGNBP1Q5YKI7 109 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 OR7E24Q6IFN5 339 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 SLC27A1Q6PCB7 646 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 C15orf39Q6ZRI6 1047 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 CPOQ8IVL8 374 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 TRIM58Q8NG06 486 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 CCT6BQ92526 530 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 SH3GL2Q99962 352 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 FKRPQ9H9S5 495 aa3.97□□□□□ -1.77
SMC4-219ENST00000487747 IGLV5-45A0A087WSX0 123 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 SMIM1B2RUZ4 78 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 BLOC1S5-TXNDC5H3BN57 136 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 ZNHIT1O43257 154 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 SEC14L5O43304 696 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 IGHV4-39P01824 125 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 INHBAP08476 426 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 GPD2P43304 727 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 MMP14P50281 582 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 LPAL2Q16609 132 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 BEST3Q8N1M1 668 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 FCAMRQ8WWV6 532 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 ORAI1Q96D31 301 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 LINGO1Q96FE5 620 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 SLC41A2Q96JW4 573 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 MPHOSPH8Q99549 860 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 FAM110AQ9BQ89 295 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 INTS2Q9H0H0 1204 aaKnown RBP3.96□□□□□ -1.78
SMC4-219ENST00000487747 TFB2MQ9H5Q4 396 aaKnown RBP3.96□□□□□ -1.78
SMC4-219ENST00000487747 SLC52A3Q9NQ40 469 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 ZNF624Q9P2J8 865 aaPredicted RBP3.96□□□□□ -1.78
SMC4-219ENST00000487747 ACSL5Q9ULC5 683 aa3.96□□□□□ -1.78
SMC4-219ENST00000487747 PTPRCP08575 1304 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 KRTAP16-1A8MUX0 517 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 TAF4O00268 1085 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 BAG4O95429 457 aaKnown RBP3.95□□□□□ -1.78
SMC4-219ENST00000487747 EGFP01133 1207 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms