RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	RPL21	P46778	160 aa	Known RBP	13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	ACADVL	P49748	655 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	WNT3A	P56704	352 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	NXPH1	P58417	271 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	GUCY2D	Q02846	1103 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	TRAF2	Q12933	501 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	MPP3	Q13368	585 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	SPARCL1	Q14515	664 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	IHH	Q14623	411 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	GRM3	Q14832	879 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	DUPD1	Q68J44	220 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	GDPD4	Q6W3E5	623 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	TMPRSS12	Q86WS5	348 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	FAM174A	Q8TBP5	190 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	IFT43	Q96FT9	208 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	SNF8	Q96H20	258 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	TUBGCP5	Q96RT8	1024 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	FICD	Q9BVA6	458 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	FSD1L	Q9BXM9	530 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	CPEB1	Q9BZB8	566 aa	Known RBP	13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	ERVMER34-1	Q9H9K5	563 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	DMGDH	Q9UI17	866 aa	Known RBP	13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	GGT7	Q9UJ14	662 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	FADS3	Q9Y5Q0	445 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991		V9GYY5	206 aa	Predicted RBP	13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991		A0A1W2PQU0	124 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	ESYT3	A0FGR9	886 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	AP1G1	O43747	822 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	SDC3	O75056	442 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	SOCS5	O75159	536 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	RFPL3	O75679	317 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	EPHA8	P29322	1005 aa	Predicted RBP	13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	EIF2S3	P41091	472 aa	Known RBP	13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	TNNT3	P45378	269 aa	Predicted RBP	13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	NEK3	P51956	506 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	TUBB4B	P68371	445 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	CALCOCO2	Q13137	446 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	OLIG2	Q13516	323 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	SLC14A2	Q15849	920 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	CFAP58	Q5T655	872 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	HES3	Q5TGS1	186 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	SEL1L3	Q68CR1	1132 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	FBXL19	Q6PCT2	694 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	KDELC1	Q6UW63	502 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	KANSL1	Q7Z3B3	1105 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	PCGF5	Q86SE9	256 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	HORMAD1	Q86X24	394 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	PPIL6	Q8IXY8	311 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	CPT1B	Q92523	772 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	KLK6	Q92876	244 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	TADA1	Q96BN2	335 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	FEM1C	Q96JP0	617 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	MRGPRX2	Q96LB1	330 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	KLHL32	Q96NJ5	620 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	APOL2	Q9BQE5	337 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	OSBPL1A	Q9BXW6	950 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	SUV39H2	Q9H5I1	410 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	LRRC40	Q9H9A6	602 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	EPB41L5	Q9HCM4	733 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	ANAPC5	Q9UJX4	755 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	CHKB	Q9Y259	395 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	AK5	Q9Y6K8	562 aa		13.09	□□□□□ -0.31
NR1H3-223	ENST00000486991	TCRBV7S3A2	A0A539	114 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	C16orf96	A6NNT2	1141 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	AREL1	O15033	823 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	USP12	O75317	370 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	SEC31A	O94979	1220 aa	Known RBP	13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	PCDH8	O95206	1070 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	AP2A1	O95782	977 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	AGT	P01019	485 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	IVD	P26440	423 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	AKT2	P31751	481 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	ABCG1	P45844	678 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	ITGA8	P53708	1063 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	CDK18	Q07002	472 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	KCNJ11	Q14654	390 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	ZNF805	Q5CZA5	627 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	ARMC12	Q5T9G4	340 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	ANKRD22	Q5VYY1	191 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	PPP1R21	Q6ZMI0	780 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	BBOF1	Q8ND07	529 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	UBXN4	Q92575	508 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	RAB7B	Q96AH8	199 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	KLHDC7B	Q96G42	594 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	ZNF641	Q96N77	438 aa	Predicted RBP	13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	MYOC	Q99972	504 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	TBL1Y	Q9BQ87	522 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	TDRD1	Q9BXT4	1180 aa	Known RBP	13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	FZD3	Q9NPG1	666 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	EIF2B3	Q9NR50	452 aa	Known RBP	13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	GPR27	Q9NS67	375 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	WHRN	Q9P202	907 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	ITM2B	Q9Y287	266 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	PCDHGA1	Q9Y5H4	931 aa		13.08	□□□□□ -0.32
NR1H3-223	ENST00000486991	RP1	P56715	2156 aa		13.07	□□□□□ -0.32
NR1H3-223	ENST00000486991	MGA	Q8IWI9	3026 aa		13.07	□□□□□ -0.32
NR1H3-223	ENST00000486991	TSPAN11	A1L157	253 aa		13.07	□□□□□ -0.32
NR1H3-223	ENST00000486991	EIF4E1B	A6NMX2	242 aa	Known RBP	13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms