RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 GCATO75600 419 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 ANXA9O76027 345 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 ASMTLO95671 621 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 FTCDO95954 541 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 NFKB1P19838 968 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 WASHC5Q12768 1159 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 IHHQ14623 411 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 PTPRRQ15256 657 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 SEL1L2Q5TEA6 688 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 ADAMTSL4Q6UY14 1074 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 TMC3Q7Z5M5 1100 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 ZNF567Q8N184 647 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 PDCD7Q8N8D1 485 aaKnown RBP10.43□□□□□ -0.74
MCF2L-216ENST00000439475 SPATA22Q8NHS9 363 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 IFI44Q8TCB0 444 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 OR1E3Q8WZA6 343 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 ANP32BQ92688 251 aaKnown RBP10.43□□□□□ -0.74
MCF2L-216ENST00000439475 SCAMP4Q969E2 229 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 TADA1Q96BN2 335 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 HIC2Q96JB3 615 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 ALS2CR12Q96Q35 445 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 BOCQ9BWV1 1114 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 LGR4Q9BXB1 951 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 FSD1LQ9BXM9 530 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 CLPBQ9H078 707 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 DPEP2Q9H4A9 486 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 TRABDQ9H4I3 376 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 CARS2Q9HA77 564 aaKnown RBP10.43□□□□□ -0.74
MCF2L-216ENST00000439475 MRPL40Q9NQ50 206 aaKnown RBP10.43□□□□□ -0.74
MCF2L-216ENST00000439475 TRNAU1APQ9NX07 287 aaKnown RBP10.43□□□□□ -0.74
MCF2L-216ENST00000439475 UBP1Q9NZI7 540 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 HACD3Q9P035 362 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 TRIM10Q9UDY6 481 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 CLCA2Q9UQC9 943 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 KNTC1P50748 2209 aa10.43□□□□□ -0.74
MCF2L-216ENST00000439475 GOLGA4Q13439 2230 aaKnown RBP10.42□□□□□ -0.74
MCF2L-216ENST00000439475 LOC285095A0A1B0GVY8 99 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 GOLGA6L3A6NEY3 463 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 C1QTNF9BB2RNN3 333 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 KCNN4O15554 427 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 ZW10O43264 779 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 MT-CO3P00414 261 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 IVLP07476 585 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 C1QTNF9P0C862 333 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 HLA-DPA1P20036 260 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 CD68P34810 354 aaPredicted RBP10.42□□□□□ -0.74
MCF2L-216ENST00000439475 GNPDA1P46926 289 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 WNT3AP56704 352 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 ILF3Q12906 894 aaKnown RBP eCLIP10.42□□□□□ -0.74
MCF2L-216ENST00000439475 BIRC2Q13490 618 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 RPS6KA1Q15418 735 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 CDKN3Q16667 212 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 ST3GAL2Q16842 350 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 HES3Q5TGS1 186 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 ZDHHC20Q5W0Z9 365 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 PDPK2PQ6A1A2 396 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 ZNF662Q6ZS27 426 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 EFL1Q7Z2Z2 1120 aaKnown RBP10.42□□□□□ -0.74
MCF2L-216ENST00000439475 ARL10Q8N8L6 244 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 FAM46DQ8NEK8 389 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 IPMKQ8NFU5 416 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 MAPK15Q8TD08 544 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 ALG3Q92685 438 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 GATA6Q92908 595 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 PDXPQ96GD0 296 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 HES6Q96HZ4 224 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 SMIM14Q96QK8 99 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 TRIB3Q96RU7 358 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 RIOK2Q9BVS4 552 aaKnown RBP10.42□□□□□ -0.74
MCF2L-216ENST00000439475 TMEM168Q9H0V1 697 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 CCDC86Q9H6F5 360 aaKnown RBP10.42□□□□□ -0.74
MCF2L-216ENST00000439475 FGF22Q9HCT0 170 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.42□□□□□ -0.74
MCF2L-216ENST00000439475 PNMA8BQ9ULN7 279 aaPredicted RBP10.42□□□□□ -0.74
MCF2L-216ENST00000439475 PADI4Q9UM07 663 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 PACSIN2Q9UNF0 486 aaPredicted RBP10.42□□□□□ -0.74
MCF2L-216ENST00000439475 GPR34Q9UPC5 381 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 SHOC2Q9UQ13 582 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 ZNF711Q9Y462 761 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 GPSM3Q9Y4H4 160 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 PTPRBP23467 1997 aa10.42□□□□□ -0.74
MCF2L-216ENST00000439475 DCHS1Q96JQ0 3298 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 CACNA1AO00555 2505 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 A0A0U1RQS6 177 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 TRABD2BA6NFA1 517 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 INPP4BO15327 924 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 DDX3YO15523 660 aaKnown RBP10.41□□□□□ -0.74
MCF2L-216ENST00000439475 PSMD3O43242 534 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 OPA1O60313 960 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 FGF1P05230 155 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 CEACAM5P06731 702 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 ACTN2P35609 894 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 INSM1Q01101 510 aaPredicted RBP10.41□□□□□ -0.74
MCF2L-216ENST00000439475 TARDBPQ13148 414 aaKnown RBP eCLIP10.41□□□□□ -0.74
MCF2L-216ENST00000439475 ANKRD20A2Q5SQ80 823 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 ANKRD20A1Q5TYW2 823 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 ANKRD20A3Q5VUR7 823 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 OGFOD3Q6PK18 319 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 DOK6Q6PKX4 331 aa10.41□□□□□ -0.74
MCF2L-216ENST00000439475 RFLNAQ6ZTI6 216 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms