RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SLC34A1Q06495 639 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 LRRC52Q8N7C0 313 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 MYDGFQ969H8 173 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 LTN1O94822 1766 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 CFIP05156 583 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 IDSP22304 550 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 GRM5P41594 1212 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 CDK18Q07002 472 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 PARP15Q460N3 678 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 SPPL2BQ8TCT7 592 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF490Q9ULM2 529 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-205ENST00000418258 CLUHO75153 1309 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 TMCC2O75069 709 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 ACADLP28330 430 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 SLC7A2P52569 658 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF132P52740 706 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 CPTPQ5TA50 214 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 VSTM1Q6UX27 236 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 RASSF6Q6ZTQ3 369 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 GALNT7Q86SF2 657 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 SHC3Q92529 594 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 MCRS1Q96EZ8 462 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 SLC47A1Q96FL8 570 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 CNOT6Q9ULM6 557 aaKnown RBP11.2□□□□□ -0.62
PTCH1-205ENST00000418258 POLR3HQ9Y535 204 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-205ENST00000418258 MEIS2O14770 477 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 KCNA5P22460 613 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 PUS10Q3MIT2 529 aaKnown RBP11.2□□□□□ -0.62
PTCH1-205ENST00000418258 HIPK1Q86Z02 1210 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF540Q8NDQ6 660 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 PIWIL2Q8TC59 973 aaKnown RBP11.2□□□□□ -0.62
PTCH1-205ENST00000418258 ATXN2LQ8WWM7 1075 aaKnown RBP11.2□□□□□ -0.62
PTCH1-205ENST00000418258 SLC9A6Q92581 669 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 KLHL5Q96PQ7 755 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 NMUR1Q9HB89 426 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 KCNMB3Q9NPA1 279 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 DDX18Q9NVP1 670 aaKnown RBP11.2□□□□□ -0.62
PTCH1-205ENST00000418258 GPC6Q9Y625 555 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-205ENST00000418258 DCLK1O15075 740 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 FAM153BP0C7A2 387 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 FAM153CQ494X1 144 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 ADAMTS15Q8TE58 950 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 FAR1Q8WVX9 515 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 PADI3Q9ULW8 664 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 ZMPSTE24O75844 475 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 FSBPO95073 299 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 ATP6V1G2O95670 118 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 ACTR3P61158 418 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 PTCHD4Q6ZW05 846 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 KCNK18Q7Z418 384 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 HID1Q8IV36 788 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 FAM71AQ8IYT1 594 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 DUSP9Q99956 384 aaKnown RBP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 ERVW-1Q9UQF0 538 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 ERVK-11Q9UQG0 969 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 PRNPP04156 253 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 HNRNPLP14866 589 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 IDO1P14902 403 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF844Q08AG5 666 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 CERCAMQ5T4B2 595 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 SEC14L3Q9UDX4 400 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 DERAQ9Y315 318 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 UBE2QL1A1L167 161 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 BTBD19C9JJ37 291 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 SEPT4O43236 478 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 SUV39H1O43463 412 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 BANF1O75531 89 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 OR4Q2P0C623 313 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 CLCNKBP51801 687 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 TOP3AQ13472 1001 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 MSANTD2Q6P1R3 559 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 ISLR2Q6UXK2 745 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 LINGO4Q6UY18 593 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 CDH24Q86UP0 819 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 TMC8Q8IU68 726 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 DLG3Q92796 817 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 CRELD1Q96HD1 420 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 FEM1CQ96JP0 617 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 TEFMQ96QE5 360 aaKnown RBP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 CIDEBQ9UHD4 219 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 CBX6O95503 412 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 TRBC1P01850 177 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 CYP1A2P05177 515 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 SPIRE1Q08AE8 756 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 PRKG2Q13237 762 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 FAM110CQ1W6H9 321 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 WASHC2DQ5SRD0 308 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 SNX20Q7Z614 316 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 TTC29Q8NA56 475 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 PTCD3Q96EY7 689 aaKnown RBP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 CXorf56Q9H5V9 222 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 PCDHB11Q9Y5F2 797 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 UBIAD1Q9Y5Z9 338 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 RPL7AP62424 266 aaKnown RBP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 SMCO1Q147U7 214 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 AMZ1Q400G9 498 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 DUSP28Q4G0W2 176 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 TRAPPC9Q96Q05 1148 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 GAL3ST4Q96RP7 486 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 MFHAS1Q9Y4C4 1052 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms