RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 DsppP97399 934 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Adamts1P97857 968 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Slc22a16Q497L8 649 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Usp17laQ61068 526 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ubp1Q811S7 540 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gjc2Q8BQU6 440 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Stx5Q8K1E0 355 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 C1qtnf12Q8R2Z0 308 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cdhr5Q8VHF2 831 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cndp2Q9D1A2 475 aaKnown RBP10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tchhl1Q9D3P1 638 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Snx5Q9D8U8 404 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ampd2Q9DBT5 798 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zbtb18Q9WUK6 522 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tsc22d3Q9Z2S7 137 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zfp780bE9Q2S6 806 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zfp882E9Q4R4 555 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ifnar2O35664 513 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cyp2b19O55071 492 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ncam1P13595 1115 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ptpn5P54830 541 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Psme3P61290 254 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pecam1Q08481 727 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zfp607aQ3TQG9 686 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Yy2Q3TTC2 378 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 InipQ3TXT3 104 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Q3TYS2 187 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 KrtdapQ3V2T4 102 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Khdrbs1Q60749 443 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Stard3Q61542 446 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr1062Q7TR71 315 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cnpy4Q8BQ47 245 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Nup54Q8BTS4 510 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Plin5Q8BVZ1 463 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pabpc5Q8C7D3 381 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Klhl25Q8R2P1 589 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Nae1Q8VBW6 534 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Det1Q9D0A0 550 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mkrn2Q9ERV1 416 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ttll9A2APC3 461 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr1049A2ARZ0 308 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ddx43D3Z6P9 646 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm10479K7N6H4 105 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rgs4O08899 205 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfm1O88998 485 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Wnt6P22727 364 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pdha2P35487 391 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Hnf4aP49698 474 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 TgfbiP82198 683 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Magee2Q52KG3 523 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Phf12Q5SPL2 1003 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Itga3Q62470 1053 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mon1aQ6PDG8 556 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gpr142Q7TQN9 365 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr1046Q7TR79 316 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Znf385bQ8BXJ8 482 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Vps50Q8CI71 964 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Acsl5Q8JZR0 683 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 GaleQ8R059 347 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 TfQ921I1 697 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Traf7Q922B6 594 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tas1r2Q925I4 843 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Smim11aQ99J19 55 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Adi1Q99JT9 179 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pramel1Q99MW3 458 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 4921501E09RikA0A0R4J054 908 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mroh5E9PUJ8 762 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 NmbrO54799 390 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Itm2bO89051 266 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Got2P05202 430 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gnao1P18872 354 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Lsp1P19973 330 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mbl1P39039 239 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 VegfbP49766 207 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 SiaeP70665 541 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cdh6P97326 790 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ikzf1Q03267 517 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Icam5Q60625 917 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gpr17Q6NS65 339 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rpl10Q6ZWV3 214 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tas2r129Q7M709 320 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ptk7Q8BKG3 1062 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr1325Q8VF43 315 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rsph1Q8VIG3 301 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ndufs1Q91VD9 727 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Syt12Q920N7 421 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 HnrnpllQ921F4 591 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fastkd2Q922E6 689 aaKnown RBP10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Grm3Q9QYS2 879 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Padi3Q9Z184 664 aa10.86□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm21083A0A0G2JFD5 256 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm12248A0A1W2P8B8 313 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zfp846G3X996 541 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm21897J3KMP5 500 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm21750L7N228 499 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rpl26P61255 145 aaKnown RBP10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 PrkcgP63318 697 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ranbp9P69566 653 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Brms1lQ3U1T3 323 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfml2bQ3V1G4 746 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms