RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 SERPINI1Q99574 410 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 ZBED2Q9BTP6 218 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 ERVK-6Q9BXR3 956 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 EFCAB1Q9HAE3 211 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 STK39Q9UEW8 545 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 VPS28Q9UK41 221 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 YIPF1Q9Y548 306 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 TSPAN8P19075 237 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 CES1P23141 567 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 ALDH1A3P47895 512 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 ATN1P54259 1190 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-211ENST00000641213 INHBCP55103 352 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 ARF5P84085 180 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 PDAP1Q13442 181 aaKnown RBP17.05■□□□□ 0.32
PHGDH-211ENST00000641213 ARHGEF6Q15052 776 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 TAF12Q16514 161 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 AFTPHQ6ULP2 937 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 BNC2Q6ZN30 1099 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-211ENST00000641213 PGAM4Q8N0Y7 254 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 LPCAT1Q8NF37 534 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 EXT2Q93063 718 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 TRMT2BQ96GJ1 504 aaKnown RBP17.05■□□□□ 0.32
PHGDH-211ENST00000641213 MUC3BQ9H195 1237 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 PCDHGC4Q9Y5F7 938 aa17.05■□□□□ 0.32
PHGDH-211ENST00000641213 UBA6A0AVT1 1052 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-211ENST00000641213 CCDC189A1A4V9 331 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 C2orf81A6NN90 581 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 H3BMM5 538 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 SOD2P04179 222 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 HSPA1AP0DMV8 641 aaKnown RBP17.04■□□□□ 0.32
PHGDH-211ENST00000641213 HSPA1BP0DMV9 641 aaKnown RBP17.04■□□□□ 0.32
PHGDH-211ENST00000641213 PSMA3P25788 255 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 PIGGQ5H8A4 983 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 FAM219BQ5XKK7 198 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 TPGS2Q68CL5 300 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 CLEC6AQ6EIG7 209 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 KBTBD6Q86V97 674 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 RHEBL1Q8TAI7 183 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 LPGAT1Q92604 370 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 DEFB118Q96PH6 123 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 WDR41Q9HAD4 459 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 TRPC7Q9HCX4 862 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 RAI2Q9Y5P3 530 aa17.04■□□□□ 0.32
PHGDH-211ENST00000641213 UBXN8O00124 270 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 UBDO15205 165 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 CD160O95971 181 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 ENO3P13929 434 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-211ENST00000641213 MTHFD2P13995 350 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 FMO4P31512 558 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 KLC1Q07866 573 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 PPP1R3AQ16821 1122 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 ZNF423Q2M1K9 1284 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 EML3Q32P44 896 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 SETMARQ53H47 684 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-211ENST00000641213 IRGCQ6NXR0 463 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 IZUMO2Q6UXV1 221 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 PTGR2Q8N8N7 351 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-211ENST00000641213 HMGCLL1Q8TB92 370 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 ATOH8Q96SQ7 321 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 ADAMTS6Q9UKP5 1117 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 MED16Q9Y2X0 877 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 CFLARO15519 480 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 SMNDC1O75940 238 aaKnown RBP eCLIP17.03■□□□□ 0.32
PHGDH-211ENST00000641213 RHOBTB1O94844 696 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 PARNO95453 639 aaKnown RBP17.03■□□□□ 0.32
PHGDH-211ENST00000641213 C1RP00736 705 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 DPP6P42658 865 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 THOP1P52888 689 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 ART3Q13508 389 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 LINGO4Q6UY18 593 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 CYHR1Q6ZMK1 362 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 GK5Q6ZS86 529 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 TCF12Q99081 682 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 NPAS2Q99743 824 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 ECSITQ9BQ95 431 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 TFB2MQ9H5Q4 396 aaKnown RBP17.03■□□□□ 0.32
PHGDH-211ENST00000641213 PAK6Q9NQU5 681 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-211ENST00000641213 SMPD4Q9NXE4 827 aa17.03■□□□□ 0.32
PHGDH-211ENST00000641213 ANKRD66B4E2M5 251 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 H3BNX3 289 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 SNAP91O60641 907 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 SRP72O76094 671 aaKnown RBP17.02■□□□□ 0.32
PHGDH-211ENST00000641213 TMCC1O94876 653 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 SIX3O95343 332 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-211ENST00000641213 LPOP22079 712 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-211ENST00000641213 CDKN1CP49918 316 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-211ENST00000641213 CDH13P55290 713 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 SQLEQ14534 574 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 UGT3A2Q3SY77 523 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 PAQR3Q6TCH7 311 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 ANKRD33Q7Z3H0 272 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 HERC6Q8IVU3 1022 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 DDX50Q9BQ39 737 aaKnown RBP17.02■□□□□ 0.32
PHGDH-211ENST00000641213 SYTL2Q9HCH5 934 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 MRGBPQ9NV56 204 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 TAS2R13Q9NYV9 303 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 STOML2Q9UJZ1 356 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 FAM50BQ9Y247 325 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 TRIM17Q9Y577 477 aa17.02■□□□□ 0.32
PHGDH-211ENST00000641213 NDUFS3O75489 264 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms