RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 C18orf12Q96KH6 178 aa6.86□□□□□ -1.31
LDHA-223ENST00000545215 HAPLN3Q96S86 360 aa6.86□□□□□ -1.31
LDHA-223ENST00000545215 KCNJ15Q99712 375 aa6.86□□□□□ -1.31
LDHA-223ENST00000545215 CCDC3Q9BQI4 270 aa6.86□□□□□ -1.31
LDHA-223ENST00000545215 CBWD1Q9BRT8 395 aa6.86□□□□□ -1.31
LDHA-223ENST00000545215 ASF1BQ9NVP2 202 aa6.86□□□□□ -1.31
LDHA-223ENST00000545215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.86□□□□□ -1.31
LDHA-223ENST00000545215 ARMCX3Q9UH62 379 aaPredicted RBP6.86□□□□□ -1.31
LDHA-223ENST00000545215 ADGRE2Q9UHX3 823 aa6.86□□□□□ -1.31
LDHA-223ENST00000545215 FBXO10Q9UK96 956 aa6.86□□□□□ -1.31
LDHA-223ENST00000545215 CPSF3Q9UKF6 684 aaKnown RBP6.86□□□□□ -1.31
LDHA-223ENST00000545215 SPO11Q9Y5K1 396 aa6.86□□□□□ -1.31
LDHA-223ENST00000545215 POLEQ07864 2286 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 RP1P56715 2156 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 TCHHQ07283 1943 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 SLC12A8A0AV02 714 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 TARSL2A2RTX5 802 aaKnown RBP6.85□□□□□ -1.31
LDHA-223ENST00000545215 GOLGA6L3A6NEY3 463 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 SERINC4A6NH21 518 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 LRRC72A6NJI9 287 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 TISP43B9A030 160 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 NEDD8-MDP1E9PL57 170 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 H7BY64 318 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 PIRO00625 290 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 CYB561D2O14569 222 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 DVL2O14641 736 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 CLIC2O15247 247 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 MSI1O43347 362 aaKnown RBP6.85□□□□□ -1.31
LDHA-223ENST00000545215 SPRY1O43609 319 aaPredicted RBP6.85□□□□□ -1.31
LDHA-223ENST00000545215 NPHS1O60500 1241 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 NEBLO76041 1014 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 SNUPNO95149 360 aaKnown RBP6.85□□□□□ -1.31
LDHA-223ENST00000545215 INHBBP09529 407 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 RECQLP46063 649 aaPredicted RBP6.85□□□□□ -1.31
LDHA-223ENST00000545215 TAF6P49848 677 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 CYP2J2P51589 502 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 ITGA1P56199 1179 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 JAM2P57087 298 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 PHC1P78364 1004 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 KCNMA1Q12791 1236 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 CETN1Q12798 172 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 DRAP1Q14919 205 aaPredicted RBP6.85□□□□□ -1.31
LDHA-223ENST00000545215 PSMD6Q15008 389 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 E2F5Q15329 346 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 GPR19Q15760 415 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 TTC31Q49AM3 519 aaPredicted RBP6.85□□□□□ -1.31
LDHA-223ENST00000545215 CCDC40Q4G0X9 1142 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 ATP1A1-AS1Q5TC04 95 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 OSTM1Q86WC4 334 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 BBS7Q8IWZ6 715 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 FAM186BQ8IYM0 893 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 THEM5Q8N1Q8 247 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 OR2T34Q8NGX1 318 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 PLCD4Q9BRC7 762 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 FAM213AQ9BRX8 229 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 JAM3Q9BX67 310 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 GPN2Q9H9Y4 310 aaPredicted RBP6.85□□□□□ -1.31
LDHA-223ENST00000545215 RBAKQ9NYW8 714 aaPredicted RBP6.85□□□□□ -1.31
LDHA-223ENST00000545215 WDR35Q9P2L0 1181 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 DSEQ9UL01 958 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 NCKAP1Q9Y2A7 1128 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 SLC27A6Q9Y2P4 619 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 C2CD2Q9Y426 696 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 MYH10P35580 1976 aa6.85□□□□□ -1.31
LDHA-223ENST00000545215 TNRC6AQ8NDV7 1962 aaKnown RBP6.85□□□□□ -1.31
LDHA-223ENST00000545215 VPS13CQ709C8 3753 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 PTPRJQ12913 1337 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 LRRC10BA6NIK2 292 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 D6RAR5 112 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 MUSKO15146 869 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 PMM2O15305 246 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 P4HA2O15460 535 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 LATO43561 262 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 ATP2C2O75185 946 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 ESR1P03372 595 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 TPM3P06753 285 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 TCN2P20062 427 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 CCND1P24385 295 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 ADSLP30566 484 aaPredicted RBP6.84□□□□□ -1.31
LDHA-223ENST00000545215 CHRNA4P43681 627 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 STX17P56962 302 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 ADAM8P78325 824 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 KRT83P78385 493 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 TFAMQ00059 246 aaKnown RBP6.84□□□□□ -1.31
LDHA-223ENST00000545215 CYP24A1Q07973 514 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 NR0B2Q15466 257 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 WSCD1Q658N2 575 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 C11orf57Q6ZUT1 292 aaPredicted RBP6.84□□□□□ -1.31
LDHA-223ENST00000545215 WDR49Q8IV35 697 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 UCMAQ8WVF2 138 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 ITLN2Q8WWU7 325 aaPredicted RBP6.84□□□□□ -1.31
LDHA-223ENST00000545215 NAT6Q93015 286 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 SAAL1Q96ER3 474 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 FCRL2Q96LA5 508 aaPredicted RBP6.84□□□□□ -1.31
LDHA-223ENST00000545215 ZNF560Q96MR9 790 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 GFM1Q96RP9 751 aaKnown RBP6.84□□□□□ -1.31
LDHA-223ENST00000545215 CMKLR1Q99788 373 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 EFHD1Q9BUP0 239 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 BBS2Q9BXC9 721 aa6.84□□□□□ -1.31
LDHA-223ENST00000545215 PCIF1Q9H4Z3 704 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms