RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 EIF3DO15371 548 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMC4-217ENST00000485867 VPS4BO75351 444 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 GCATO75600 419 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 LUC7L3O95232 432 aaKnown RBP6.71□□□□□ -1.34
SMC4-217ENST00000485867 CLDN1O95832 211 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 ZBED1O96006 694 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 ASS1P00966 412 aaKnown RBP6.71□□□□□ -1.34
SMC4-217ENST00000485867 PRKCGP05129 697 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 RPLP0P05388 317 aaKnown RBP6.71□□□□□ -1.34
SMC4-217ENST00000485867 SLC11A2P49281 568 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 NUMBP49757 651 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 AP3M2P53677 418 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 MAPK10P53779 464 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 ZFP36L1Q07352 338 aaKnown RBP6.71□□□□□ -1.34
SMC4-217ENST00000485867 EIF2B5Q13144 721 aaKnown RBP6.71□□□□□ -1.34
SMC4-217ENST00000485867 FGL2Q14314 439 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 SLC9A5Q14940 896 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 SGSM1Q2NKQ1 1148 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 C1QL3Q5VWW1 255 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 RRAGBQ5VZM2 374 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 BSPRYQ5W0U4 402 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 NUGGCQ68CJ6 796 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 SEL1L3Q68CR1 1132 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 MSANTD2Q6P1R3 559 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 STXBP4Q6ZWJ1 553 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 CPNE8Q86YQ8 564 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 KYQ8NBH2 561 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 CPA5Q8WXQ8 436 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 TMEM159Q96B96 161 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 LRRC61Q9BV99 259 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 CPEB1Q9BZB8 566 aaKnown RBP6.71□□□□□ -1.34
SMC4-217ENST00000485867 B3GNT4Q9C0J1 378 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 TCEAL2Q9H3H9 227 aaPredicted RBP6.71□□□□□ -1.34
SMC4-217ENST00000485867 SPASTQ9UBP0 616 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 GULP1Q9UBP9 304 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 VPS4AQ9UN37 437 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 HS3ST3A1Q9Y663 406 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 APCP25054 2843 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 CELSR1Q9NYQ6 3014 aa6.71□□□□□ -1.34
SMC4-217ENST00000485867 WIPF3A6NGB9 483 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 YJEFN3A6XGL0 299 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 ZNF891A8MT65 544 aaPredicted RBP6.7□□□□□ -1.34
SMC4-217ENST00000485867 E7ENQ6 273 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 STMND1H3BQB6 276 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 TULP2O00295 520 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 MCF2LO15068 1137 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 PCDH8O95206 1070 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 DDAH2O95865 285 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 BMP15O95972 392 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 CTSLP07711 333 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 ANXA6P08133 673 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 LIFP15018 202 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 NR1D1P20393 614 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 NNMTP40261 264 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 RABIFP47224 123 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 TKTL1P51854 596 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 ADKP55263 362 aaKnown RBP6.7□□□□□ -1.34
SMC4-217ENST00000485867 PLP2Q04941 152 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 C1orf61Q13536 156 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 PDE1CQ14123 709 aaPredicted RBP6.7□□□□□ -1.34
SMC4-217ENST00000485867 ZACNQ401N2 412 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 DCAF6Q58WW2 860 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 MS4A13Q5J8X5 152 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 ESRP1Q6NXG1 681 aaKnown RBP6.7□□□□□ -1.34
SMC4-217ENST00000485867 EPM2AIP1Q7L775 607 aaPredicted RBP6.7□□□□□ -1.34
SMC4-217ENST00000485867 TMPRSS9Q7Z410 1059 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 GGNQ86UU5 652 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 CCDC117Q8IWD4 279 aaPredicted RBP6.7□□□□□ -1.34
SMC4-217ENST00000485867 UNC45BQ8IWX7 931 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 CCDC65Q8IXS2 484 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 CFAP52Q8N1V2 620 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 ARL10Q8N8L6 244 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 PARD3BQ8TEW8 1205 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 BTN2A2Q8WVV5 523 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 TAF4BQ92750 862 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 AZIN2Q96A70 460 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 TBATAQ96M53 351 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 CMKLR1Q99788 373 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 UBXN6Q9BZV1 441 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 CLPBQ9H078 707 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 LRRN3Q9H3W5 708 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 CYP3A43Q9HB55 503 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 APOBEC3BQ9UH17 382 aaKnown RBP6.7□□□□□ -1.34
SMC4-217ENST00000485867 IPO11Q9UI26 975 aaKnown RBP6.7□□□□□ -1.34
SMC4-217ENST00000485867 PNMA8BQ9ULN7 279 aaPredicted RBP6.7□□□□□ -1.34
SMC4-217ENST00000485867 NAALADL1Q9UQQ1 740 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 TP53TG5Q9Y2B4 290 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 NF1P21359 2839 aa6.7□□□□□ -1.34
SMC4-217ENST00000485867 TRBV23OR9-2A0A075B6M9 112 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 KPNA3O00505 521 aaPredicted RBP6.69□□□□□ -1.34
SMC4-217ENST00000485867 YY2O15391 372 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 DUX1O43812 170 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 CNTN5O94779 1100 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 HLA-DRAP01903 254 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 RPN1P04843 607 aaKnown RBP6.69□□□□□ -1.34
SMC4-217ENST00000485867 PDGFRAP16234 1089 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 ZNF18P17022 549 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 PAMP19021 973 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 CD58P19256 250 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 GJB2P29033 226 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms