RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 NUP107P57740 925 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 TUBA4AP68366 448 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ZNF33AQ06730 810 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 NFYCQ13952 458 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 NEDD8Q15843 81 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 MARC1Q5VT66 337 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 METTL23Q86XA0 190 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ROPN1LQ96C74 230 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 UHRF1Q96T88 793 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 HOPXQ9BPY8 73 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 TRMOQ9BU70 441 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 MUC3BQ9H195 1237 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC25A51Q9H1U9 297 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 POLR1BQ9H9Y6 1135 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 MRM3Q9HC36 420 aaKnown RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ARMC1Q9NVT9 282 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 UXTQ9UBK9 157 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ST3GAL5Q9UNP4 418 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 FADS3Q9Y5Q0 445 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 CROCCQ5TZA2 2017 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 UBA6A0AVT1 1052 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 FGF10O15520 208 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 GJB3O75712 270 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 HAPLN1P10915 354 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 EEF1B2P24534 225 aaKnown RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ARL1P40616 181 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC5A3P53794 718 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 HERVK_113P63132 956 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 CREB5Q02930 508 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ZIK1Q3SY52 487 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ZBED5Q49AG3 693 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 OTUD3Q5T2D3 398 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 KDELC1Q6UW63 502 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 TLK2Q86UE8 772 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 EPHX4Q8IUS5 362 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 LRRC58Q96CX6 371 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 HMCESQ96FZ2 354 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ERVK-6Q9BXR3 956 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 OSBPL6Q9BZF3 934 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 SP110Q9HB58 689 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 FAM105AQ9NUU6 356 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 GID8Q9NWU2 228 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 CIDEBQ9UHD4 219 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 FNDC3AQ9Y2H6 1198 aaKnown RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 HS3ST4Q9Y661 456 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 PAPPA2Q9BXP8 1791 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 BPTFQ12830 3046 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 CCL15-CCL14A0A0B4J2E2 113 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 C17orf102A2RUQ5 167 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ARL5CA6NH57 179 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ARPC2O15144 300 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 BMP10O95393 424 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 PRSS56P0CW18 603 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 HOXD8P13378 290 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 LBPP18428 481 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC6A2P23975 617 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 CYP2C18P33260 490 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 RENBPP51606 427 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 PLIN5Q00G26 463 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 CTBSQ01459 385 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 CCL15Q16663 113 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 UGT3A2Q3SY77 523 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ANKDD1AQ495B1 522 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 DUS1LQ6P1R4 473 aaKnown RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 RTL3Q8N8U3 475 aaKnown RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 DCBLD1Q8N8Z6 715 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 ESAMQ96AP7 390 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 CENPNQ96H22 339 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 VPS50Q96JG6 964 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 TMEM74Q96NL1 305 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 RTP3Q9BQQ7 232 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 AGO3Q9H9G7 860 aaKnown RBP7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 PLGRKTQ9HBL7 147 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 NEU3Q9UQ49 428 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 FAM50BQ9Y247 325 aa7.52□□□□□ -1.21
SMARCC1-202ENST00000425518 A0A1B0GTL3 188 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 AQP12BA6NM10 295 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 SUPT3HB4E1H0 165 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 DLGAP1O14490 977 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 CNTN5O94779 1100 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ATE1O95260 518 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 OR4Q2P0C623 313 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC2A3P11169 496 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 PMS2P3Q13401 168 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 IHHQ14623 411 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 OR4D1Q15615 310 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 XKR5Q6UX68 686 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 HACD2Q6Y1H2 254 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ANKRD23Q86SG2 305 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 AQP12AQ8IXF9 295 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 DHRSXQ8N5I4 330 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 IRGQQ8WZA9 623 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 PSMG2Q969U7 264 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ZUFSPQ96AP4 578 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 C9orf16Q9BUW7 83 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 NMUR1Q9HB89 426 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 VPS45Q9NRW7 570 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ABCC13Q9NSE7 274 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 SLAMF8Q9P0V8 285 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 USP22Q9UPT9 525 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms