RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 USP46P62068 366 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 SULT2A1Q06520 285 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 TAF10Q12962 218 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 GPR17Q13304 367 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 FLOT2Q14254 428 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 OCLNQ16625 522 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 MGAT5BQ3V5L5 792 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 PIGGQ5H8A4 983 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 TCHHL1Q5QJ38 904 aaPredicted RBP7.28□□□□□ -1.24
VPS13C-206ENST00000558338 SDHAF4Q5VUM1 108 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 ANKS3Q6ZW76 656 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 CHSY3Q70JA7 882 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 KDELC2Q7Z4H8 507 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 PTAR1Q7Z6K3 402 aaPredicted RBP7.28□□□□□ -1.24
VPS13C-206ENST00000558338 RTN4RL1Q86UN2 441 aaPredicted RBP7.28□□□□□ -1.24
VPS13C-206ENST00000558338 CUZD1Q86UP6 607 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 MIB1Q86YT6 1006 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 KBTBD2Q8IY47 623 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 PELI3Q8N2H9 469 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 FAM174AQ8TBP5 190 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 BRSK1Q8TDC3 778 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 GDPD5Q8WTR4 605 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 GATA6Q92908 595 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 IGSF8Q969P0 613 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 HDAC10Q969S8 669 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 RCN3Q96D15 328 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 KLHL5Q96PQ7 755 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 TRAPPC9Q96Q05 1148 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 NDNQ99608 321 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 OLFM1Q99784 485 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 SEMA3CQ99985 751 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 FAM192AQ9GZU8 254 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 MAGEH1Q9H213 219 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 WDR41Q9HAD4 459 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 CATSPERZQ9NTU4 200 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 DLGAP2Q9P1A6 1054 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 SEPT3Q9UH03 358 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 TMCO1Q9UM00 188 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 SUFUQ9UMX1 484 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 COPG1Q9Y678 874 aaKnown RBP7.28□□□□□ -1.24
VPS13C-206ENST00000558338 GREB1Q4ZG55 1949 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 UTRNP46939 3433 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 BBIP1A8MTZ0 92 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 TRIM38O00635 465 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 UBDO15205 165 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 CD3EAPO15446 510 aaKnown RBP7.28□□□□□ -1.24
VPS13C-206ENST00000558338 LDB2O43679 373 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 TLR5O60602 858 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 PRMT3O60678 531 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 GPC4O75487 556 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 ZMPSTE24O75844 475 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 STAMBPO95630 424 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 S1PR4O95977 384 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 ALDH2P05091 517 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 ZDHHC11BP0C7U3 371 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 ENO3P13929 434 aaPredicted RBP7.28□□□□□ -1.24
VPS13C-206ENST00000558338 SELPP16109 830 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 ETFBP38117 255 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 PSMD8P48556 350 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 HSPA13P48723 471 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 SLC11A2P49281 568 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 CDH4P55283 916 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 BFSP2Q13515 415 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 TRIP10Q15642 601 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 ZNF423Q2M1K9 1284 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 TYSND1Q2T9J0 566 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 FUT10Q6P4F1 479 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 AFTPHQ6ULP2 937 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 HACD2Q6Y1H2 254 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 LRRC8DQ7L1W4 858 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 ST13P4Q8IZP2 240 aaPredicted RBP7.28□□□□□ -1.24
VPS13C-206ENST00000558338 PQLC1Q8N2U9 271 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 ICA1LQ8NDH6 482 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 RHEBL1Q8TAI7 183 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 LRGUKQ96M69 825 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 SEPT5Q99719 369 aaPredicted RBP7.28□□□□□ -1.24
VPS13C-206ENST00000558338 MGME1Q9BQP7 344 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 ZBED2Q9BTP6 218 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 TTLL2Q9BWV7 592 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 PDFQ9HBH1 243 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 SYTL2Q9HCH5 934 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 NMRK2Q9NPI5 230 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 SUCOQ9UBS9 1254 aaKnown RBP7.28□□□□□ -1.24
VPS13C-206ENST00000558338 DNMT3LQ9UJW3 386 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 LRFN2Q9ULH4 789 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 PRKAB1Q9Y478 270 aa7.28□□□□□ -1.24
VPS13C-206ENST00000558338 DPPA5A6NC42 116 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 SLC38A8A6NNN8 435 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 ACSL4O60488 711 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 BCAS2O75934 225 aaPredicted RBP7.27□□□□□ -1.25
VPS13C-206ENST00000558338 HMBSP08397 361 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 UQCRBP14927 111 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 PMLP29590 882 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 CDC25CP30307 473 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 CCR10P46092 362 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 ACADVLP49748 655 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 HERVK_113P63132 956 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 SP3Q02447 781 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 MED21Q13503 144 aa7.27□□□□□ -1.25
VPS13C-206ENST00000558338 PEX6Q13608 980 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms