RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 ART3Q13508 389 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 ZNF678Q5SXM1 525 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 HECTD3Q5T447 861 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 ALG1LQ6GMV1 187 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 TMEM154Q6P9G4 183 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 C16orf59Q7L2K0 433 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 GPR150Q8NGU9 434 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 WBP2Q969T9 261 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 PSKH2Q96QS6 385 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 VN1R3Q9BXE9 311 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 POLR3BQ9NW08 1133 aaPredicted RBP20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 STK39Q9UEW8 545 aa20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 PRPF19Q9UMS4 504 aaKnown RBP20.39■□□□□ 0.85
TUBGCP3-204ENST00000464139 CCDC189A1A4V9 331 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 CORO1AP31146 461 aaKnown RBP20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 SLC26A3P40879 764 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 CDH13P55290 713 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 MRPS35P82673 323 aaKnown RBP20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 HERC3Q15034 1050 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 SLC8B1Q6J4K2 584 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 SDCCAG8Q86SQ7 713 aaPredicted RBP20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 KBTBD6Q86V97 674 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 SNX31Q8N9S9 440 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 CDK5RAP1Q96SZ6 601 aaKnown RBP20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 WDR41Q9HAD4 459 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 MEAF6Q9HAF1 191 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 TRAF6Q9Y4K3 522 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 LAMA2P24043 3122 aaKnown RBP20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 UBA6A0AVT1 1052 aaPredicted RBP20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 A6NHS1 94 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 CBX4O00257 560 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 SCAMP3O14828 347 aaKnown RBP20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 HOXA2O43364 376 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 KDELR3O43731 214 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 STC1P52823 247 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 LAMB3Q13751 1172 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 BTG3Q14201 252 aaPredicted RBP20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 UNC50Q53HI1 259 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 OR4K2Q8NGD2 314 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 PEX13Q92968 403 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 FAR2Q96K12 515 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 SERPINI1Q99574 410 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 EFCAB1Q9HAE3 211 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 MTRRQ9UBK8 725 aa20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 CORO1CQ9ULV4 474 aaPredicted RBP20.38■□□□□ 0.85
TUBGCP3-204ENST00000464139 DPPA5A6NC42 116 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 LRRC14BA6NHZ5 514 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 H3BMM5 538 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 H3BNX3 289 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 INSIG1O15503 277 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 STC2O76061 302 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 RHOCP08134 193 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 XRCC1P18887 633 aaPredicted RBP20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 TUFMP49411 452 aaKnown RBP20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 ALDH7A1P49419 539 aaKnown RBP20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 SATB1Q01826 763 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 MTA1Q13330 715 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 CEACAM7Q14002 265 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 OR4D1Q15615 310 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 ZNF423Q2M1K9 1284 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 PIGGQ5H8A4 983 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 AFAP1L2Q8N4X5 818 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 MDGA1Q8NFP4 955 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 HMGCLL1Q8TB92 370 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 TMA16Q96EY4 203 aaKnown RBP20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 ZBED2Q9BTP6 218 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 RNF38Q9H0F5 515 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 PCDHGC4Q9Y5F7 938 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 ATP6AP2A0A1C7CYW4 349 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 PPP6CO00743 305 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 ATP6AP2O75787 350 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 SIX3O95343 332 aaPredicted RBP20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 ZNF37AP17032 561 aaPredicted RBP20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 HMGA1P17096 107 aaKnown RBP20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 DEFB115Q30KQ5 88 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 USP41Q3LFD5 358 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 CHSY3Q70JA7 882 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 DEFB128Q7Z7B8 93 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 PGAM4Q8N0Y7 254 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 CYP2S1Q96SQ9 504 aa20.37■□□□□ 0.85
TUBGCP3-204ENST00000464139 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 UBXN8O00124 270 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 UBDO15205 165 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 SMIM24O75264 130 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 CLDN11O75508 207 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 PEX2P28328 305 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 FMO4P31512 558 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 ZNF140P52738 457 aaPredicted RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 ATXN3P54252 364 aaPredicted RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 ZNF177Q13360 481 aaPredicted RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 PDAP1Q13442 181 aaKnown RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 PTPRRQ15256 657 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 CYTH1Q15438 398 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 CAPRIN2Q6IMN6 1127 aaKnown RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 GLT6D1Q7Z4J2 308 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 LRRC43Q8N309 656 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 PTGR2Q8N8N7 351 aaPredicted RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 L3HYPDHQ96EM0 354 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 AARSD1Q9BTE6 412 aaKnown RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 TRPC7Q9HCX4 862 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms