RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 CDYLQ9Y232 598 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 UTRNP46939 3433 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 AGRPO00253 132 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 MDM4O15151 490 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 ZBTB14O43829 449 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 BCAS2O75934 225 aaPredicted RBP15.84■□□□□ 0.13
DHFR-201ENST00000439211 RECQL4O94761 1208 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 PPP2R2BQ00005 443 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 SLC9B1Q4ZJI4 515 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 CYP20A1Q6UW02 462 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 KIAA0408Q6ZU52 694 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 RYBPQ8N488 228 aaPredicted RBP15.84■□□□□ 0.13
DHFR-201ENST00000439211 ZNF781Q8N8C0 355 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 IPMKQ8NFU5 416 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 EDEM1Q92611 657 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 MFSD3Q96ES6 412 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 NMRAL1Q9HBL8 299 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 CNTN3Q9P232 1028 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 RUVBL2Q9Y230 463 aaKnown RBP15.84■□□□□ 0.13
DHFR-201ENST00000439211 IPPQ9Y573 584 aa15.84■□□□□ 0.13
DHFR-201ENST00000439211 RFPL2O75678 378 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 CYP2C8P10632 490 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 TPSB2P20231 275 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 IL12AP29459 219 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 ACADSBP45954 432 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 TPSAB1Q15661 275 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 CRY1Q16526 586 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 CHSY3Q70JA7 882 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 CDH24Q86UP0 819 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 MICU2Q8IYU8 434 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 C6orf62Q9GZU0 229 aaPredicted RBP15.83■□□□□ 0.13
DHFR-201ENST00000439211 SMOXQ9NWM0 555 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 IFT80Q9P2H3 777 aaPredicted RBP15.83■□□□□ 0.13
DHFR-201ENST00000439211 MID2Q9UJV3 735 aa15.83■□□□□ 0.13
DHFR-201ENST00000439211 ALDOAP04075 364 aaKnown RBP15.83■□□□□ 0.12
DHFR-201ENST00000439211 C8BP07358 591 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 SLC9A3P48764 834 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 PGGT1BP53609 377 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 USP41Q3LFD5 358 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 CERCAMQ5T4B2 595 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 CADM2Q8N3J6 435 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 OR52B2Q96RD2 323 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 C9orf16Q9BUW7 83 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 SOX17Q9H6I2 414 aaPredicted RBP15.83■□□□□ 0.12
DHFR-201ENST00000439211 PTPRHQ9HD43 1115 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 PNPLA8Q9NP80 782 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 ADAMTS5Q9UNA0 930 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 PPME1Q9Y570 386 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 TOMM70O94826 608 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 IL1BP01584 269 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 DGCR6Q14129 220 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 STK11Q15831 433 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 RASSF5Q8WWW0 418 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 SDCCAG3Q96C92 435 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 C2orf49Q9BVC5 232 aaPredicted RBP15.83■□□□□ 0.12
DHFR-201ENST00000439211 OR2B2Q9GZK3 357 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 NXF3Q9H4D5 531 aaKnown RBP15.83■□□□□ 0.12
DHFR-201ENST00000439211 CYP4F12Q9HCS2 524 aa15.83■□□□□ 0.12
DHFR-201ENST00000439211 TSPAN4O14817 238 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 PIGNO95427 931 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 C22orf31O95567 290 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 DCKP27707 260 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 IMPG1Q17R60 797 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 TRIM15Q9C019 465 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 ATXN3LQ9H3M9 355 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 AREL1O15033 823 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 USP2O75604 605 aaPredicted RBP15.82■□□□□ 0.12
DHFR-201ENST00000439211 PRKCAP17252 672 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 PSMA4P25789 261 aaKnown RBP15.82■□□□□ 0.12
DHFR-201ENST00000439211 HADHAP40939 763 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 TKTL1P51854 596 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 RACK1P63244 317 aaKnown RBP15.82■□□□□ 0.12
DHFR-201ENST00000439211 POU6F1Q14863 301 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 GRIK4Q16099 956 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 OTOP3Q7RTS5 596 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 KCNMB4Q86W47 210 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 DDIASQ8IXT1 998 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 ANKRD52Q8NB46 1076 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 GIPC2Q8TF65 315 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 QKIQ96PU8 341 aaKnown RBP eCLIP15.82■□□□□ 0.122e-10■■■■■ 50.2
DHFR-201ENST00000439211 CPNE1Q99829 537 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 ANKRD60Q9BZ19 345 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 RNF181Q9P0P0 153 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 MORF4L1Q9UBU8 362 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 LRRC37AA6NMS7 1700 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 MOCS2O96007 188 aaPredicted RBP15.82■□□□□ 0.12
DHFR-201ENST00000439211 CLK1P49759 484 aaKnown RBP15.82■□□□□ 0.12
DHFR-201ENST00000439211 IL1RL1Q01638 556 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 PPP1R3AQ16821 1122 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 TMEM198Q66K66 360 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 NOTUMQ6P988 496 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 FKBP9P1Q75LS8 142 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 GRPEL2Q8TAA5 225 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 URGCPQ8TCY9 931 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 ACMSDQ8TDX5 336 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 ZFP90Q8TF47 636 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 PROX1Q92786 737 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 OMDQ99983 421 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 TXNRD2Q9NNW7 524 aa15.82■□□□□ 0.12
DHFR-201ENST00000439211 UBQLN1Q9UMX0 589 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms