RNA–Protein interactions for RNA: ENST00000295124.8

CCDC138-201, Transcript of coiled-coil domain containing 138, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC138, Length 2,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-201ENST00000295124 CCDC189A1A4V9 331 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 XRCC1P18887 633 aaPredicted RBP12.8□□□□□ -0.36
CCDC138-201ENST00000295124 PMLP29590 882 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 CDH4P55283 916 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 CDH13P55290 713 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 GALNT1Q10472 559 aaPredicted RBP12.8□□□□□ -0.36
CCDC138-201ENST00000295124 MTA1Q13330 715 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 ART3Q13508 389 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 LAMB3Q13751 1172 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 SLC8B1Q6J4K2 584 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 CYHR1Q6ZMK1 362 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 GK5Q6ZS86 529 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 SDCCAG8Q86SQ7 713 aaPredicted RBP12.8□□□□□ -0.36
CCDC138-201ENST00000295124 PGAM4Q8N0Y7 254 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 HMGCLL1Q8TB92 370 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 EXT2Q93063 718 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 SPDL1Q96EA4 605 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 SERPINI1Q99574 410 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 CATSPERZQ9NTU4 200 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 UBA2Q9UBT2 640 aaPredicted RBP12.8□□□□□ -0.36
CCDC138-201ENST00000295124 SEPT3Q9UH03 358 aa12.8□□□□□ -0.36
CCDC138-201ENST00000295124 H3BMM5 538 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 PPP6CO00743 305 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 MT-CO1P00395 513 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 ZNF37AP17032 561 aaPredicted RBP12.79□□□□□ -0.36
CCDC138-201ENST00000295124 STC1P52823 247 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 MS4A2Q01362 244 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 UNC50Q53HI1 259 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 BBS5Q8N3I7 341 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 GATA6Q92908 595 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 RMDN1Q96DB5 314 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 L3HYPDHQ96EM0 354 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 TMEM175Q9BSA9 504 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 CINPQ9BW66 212 aaPredicted RBP12.79□□□□□ -0.36
CCDC138-201ENST00000295124 MRPL9Q9BYD2 267 aaKnown RBP12.79□□□□□ -0.36
CCDC138-201ENST00000295124 DLGAP2Q9P1A6 1054 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 ATP6AP2A0A1C7CYW4 349 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 UBDO15205 165 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 INSIG1O15503 277 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 KDELR3O43731 214 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 ATP6AP2O75787 350 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 SIX3O95343 332 aaPredicted RBP12.79□□□□□ -0.36
CCDC138-201ENST00000295124 SEC24AO95486 1093 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 PRLP01236 227 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 HSPA1AP0DMV8 641 aaKnown RBP12.79□□□□□ -0.36
CCDC138-201ENST00000295124 HSPA1BP0DMV9 641 aaKnown RBP12.79□□□□□ -0.36
CCDC138-201ENST00000295124 PEX2P28328 305 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 SUOXP51687 545 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 OXCT1P55809 520 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 OR4D1Q15615 310 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 SFT2D3Q587I9 215 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 HECTD3Q5T447 861 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 SNX31Q8N9S9 440 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 MDGA1Q8NFP4 955 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 OR4K2Q8NGD2 314 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 GDPD5Q8WTR4 605 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 TMA16Q96EY4 203 aaKnown RBP12.79□□□□□ -0.36
CCDC138-201ENST00000295124 CAPNS2Q96L46 248 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 CDK5RAP1Q96SZ6 601 aaKnown RBP12.79□□□□□ -0.36
CCDC138-201ENST00000295124 TRMOQ9BU70 441 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 VN1R3Q9BXE9 311 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 VPS28Q9UK41 221 aa12.79□□□□□ -0.36
CCDC138-201ENST00000295124 LAMA2P24043 3122 aaKnown RBP12.78□□□□□ -0.36
CCDC138-201ENST00000295124 LRRC14BA6NHZ5 514 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 UBXN8O00124 270 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 CBX4O00257 560 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 HOXA2O43364 376 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 TSPAN3O60637 253 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 CLDN11O75508 207 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 STC2O76061 302 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 PENKP01210 267 aaPredicted RBP12.78□□□□□ -0.36
CCDC138-201ENST00000295124 LINGO3P0C6S8 592 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 MTHFD2P13995 350 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 HMGA1P17096 107 aaKnown RBP12.78□□□□□ -0.36
CCDC138-201ENST00000295124 HDCP19113 662 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 CR2P20023 1033 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 PAX7P23759 505 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 CORO1AP31146 461 aaKnown RBP12.78□□□□□ -0.36
CCDC138-201ENST00000295124 TUFMP49411 452 aaKnown RBP12.78□□□□□ -0.36
CCDC138-201ENST00000295124 ZNF140P52738 457 aaPredicted RBP12.78□□□□□ -0.36
CCDC138-201ENST00000295124 HERVK_113P63132 956 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 SH3BP2P78314 561 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 TYSND1Q2T9J0 566 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 AFAP1L2Q8N4X5 818 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 WBP2Q969T9 261 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 AARSD1Q9BTE6 412 aaKnown RBP12.78□□□□□ -0.36
CCDC138-201ENST00000295124 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 ERVK-6Q9BXR3 956 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 RNF38Q9H0F5 515 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 EBF3Q9H4W6 596 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 TRPC7Q9HCX4 862 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 NLE1Q9NVX2 485 aaPredicted RBP12.78□□□□□ -0.36
CCDC138-201ENST00000295124 MTRRQ9UBK8 725 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 RIMKLBQ9ULI2 386 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 PCDHGC4Q9Y5F7 938 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 UBA6A0AVT1 1052 aaPredicted RBP12.78□□□□□ -0.36
CCDC138-201ENST00000295124 SMIM24O75264 130 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 CRTAMO95727 393 aa12.78□□□□□ -0.36
CCDC138-201ENST00000295124 RHOCP08134 193 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms