RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 CXXC4Q9H2H0 198 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 MRPL44Q9H9J2 332 aaKnown RBP8.36□□□□□ -1.07
PRIM1-208ENST00000552590 FBXO8Q9NRD0 319 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 AGPAT4Q9NRZ5 378 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 SLC25A13Q9UJS0 675 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 B3GNT3Q9Y2A9 372 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 SONP18583 2426 aaKnown RBP8.36□□□□□ -1.07
PRIM1-208ENST00000552590 POM121CA8CG34 1229 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 POLR1CO15160 346 aaPredicted RBP8.35□□□□□ -1.07
PRIM1-208ENST00000552590 CLIC2O15247 247 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 SPTLC2O15270 562 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 RECKO95980 971 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 ZBED1O96006 694 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 IGLV3-27P01718 113 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 PRNPP04156 253 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 IDEP14735 1019 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 KIR3DL1P43629 444 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 SRP54P61011 504 aaKnown RBP8.35□□□□□ -1.07
PRIM1-208ENST00000552590 DNASE1L3Q13609 305 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 RAPSNQ13702 412 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 DUS1LQ6P1R4 473 aaKnown RBP8.35□□□□□ -1.07
PRIM1-208ENST00000552590 UNC45BQ8IWX7 931 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 SH2D3CQ8N5H7 860 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 THAP4Q8WY91 577 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 PDXPQ96GD0 296 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 ULBP1Q9BZM6 244 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 ILKAPQ9H0C8 392 aaPredicted RBP8.35□□□□□ -1.07
PRIM1-208ENST00000552590 ACTL8Q9H568 366 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 BLOC1S4Q9NUP1 217 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 ITM2BQ9Y287 266 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 PCDHGA6Q9Y5G7 932 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 PIKFYVEQ9Y2I7 2098 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 MEGF8Q7Z7M0 2845 aa8.35□□□□□ -1.07
PRIM1-208ENST00000552590 ZNF185O15231 689 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 PHACTR2O75167 634 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 LEFTY1O75610 366 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 GCNT3O95395 438 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 MT-CO1P00395 513 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 DNAJA1P31689 397 aaKnown RBP8.34□□□□□ -1.07
PRIM1-208ENST00000552590 TOB1P50616 345 aaPredicted RBP8.34□□□□□ -1.07
PRIM1-208ENST00000552590 TKTL1P51854 596 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 RPS18P62269 152 aaKnown RBP8.34□□□□□ -1.07
PRIM1-208ENST00000552590 NR1D2Q14995 579 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 ANO6Q4KMQ2 910 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 RAB41Q5JT25 222 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 DCAF10Q5QP82 559 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 BSPRYQ5W0U4 402 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 PM20D1Q6GTS8 502 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 FOXR2Q6PJQ5 311 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 PIGZQ86VD9 579 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 UNC93AQ86WB7 457 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 CIR1Q86X95 450 aaPredicted RBP8.34□□□□□ -1.07
PRIM1-208ENST00000552590 LGI2Q8N0V4 545 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 ZNF808Q8N4W9 903 aaPredicted RBP8.34□□□□□ -1.07
PRIM1-208ENST00000552590 NECAB1Q8N987 351 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 CCL4L1Q8NHW4 92 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 ASB12Q8WXK4 309 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 NRGNQ92686 78 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 MEGF10Q96KG7 1140 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 RUFY1Q96T51 708 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 FOXC2Q99958 501 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 DDX50Q9BQ39 737 aaKnown RBP8.34□□□□□ -1.07
PRIM1-208ENST00000552590 ZMYND15Q9H091 742 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 VRTNQ9H8Y1 702 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 KLQ9UEF7 1012 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 USP25Q9UHP3 1055 aa8.34□□□□□ -1.07
PRIM1-208ENST00000552590 IGHV1OR21-1A0A087WYE8 117 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 FRMD3A2A2Y4 597 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 YJEFN3A6XGL0 299 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 E7ENQ6 273 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 K7ERQ8 282 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 NEMP1O14524 444 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 ZW10O43264 779 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 AP1G1O43747 822 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 TNFP01375 233 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 SRCP12931 536 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 BMP6P22004 513 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 PRPHP41219 470 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 PLK1P53350 603 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 TBX4P57082 545 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 SLC12A1Q13621 1099 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 UGT8Q16880 541 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 TMEM71Q6P5X7 295 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 CT55Q8WUE5 264 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 RELTQ969Z4 430 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 AZIN2Q96A70 460 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 ALG14Q96F25 216 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 STAMBPL1Q96FJ0 436 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 CCDC120Q96HB5 630 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 PPP1R16AQ96I34 528 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 FGFBP2Q9BYJ0 223 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 PDRG1Q9NUG6 133 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 GPR83Q9NYM4 423 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 IL36AQ9UHA7 158 aa8.33□□□□□ -1.08
PRIM1-208ENST00000552590 G3BP2Q9UN86 482 aaKnown RBP8.33□□□□□ -1.08
PRIM1-208ENST00000552590 ANK3Q12955 4377 aaKnown RBP8.33□□□□□ -1.08
PRIM1-208ENST00000552590 SLC26A4O43511 780 aa8.32□□□□□ -1.08
PRIM1-208ENST00000552590 SMAD6O43541 496 aaKnown RBP8.32□□□□□ -1.08
PRIM1-208ENST00000552590 TSPAN6O43657 245 aa8.32□□□□□ -1.08
PRIM1-208ENST00000552590 EIF5BO60841 1220 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms