RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 HIST2H2ACQ16777 129 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 METTL7BQ6UX53 244 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 DEFB128Q7Z7B8 93 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 BEND7Q8N7W2 519 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 ST13P5Q8NFI4 369 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 DMRTB1Q96MA1 342 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 FERD3LQ96RJ6 166 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 FUNDC2Q9BWH2 189 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 ASPSCR1Q9BZE9 553 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 KCNN2Q9H2S1 579 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 NARFLQ9H6Q4 476 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 TXNRD2Q9NNW7 524 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 KCNH7Q9NS40 1196 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 AP3M1Q9Y2T2 418 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 WDR90Q96KV7 1748 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 TGFB1I1O43294 461 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 TBX1O43435 398 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 IFNA16P05015 189 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 FGF3P11487 239 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 GSTM2P28161 218 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 YAP1P46937 504 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 NPTX2P47972 431 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 TOP3AQ13472 1001 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 CCL14Q16627 93 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 GEN1Q17RS7 908 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 DUSP28Q4G0W2 176 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 PAGE2Q7Z2X7 111 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 MFSD4AQ8N468 514 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 DTX3Q8N9I9 347 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 FAM156AQ8NDB6 213 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 MARK4Q96L34 752 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 ZNF778Q96MU6 729 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 TUFT1Q9NNX1 390 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 DNMT3BQ9UBC3 853 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 CDYLQ9Y232 598 aa10.92□□□□□ -0.66
CLSTN3-207ENST00000537408 H3BRB1 525 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 H3BUI4 141 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 ZBTB39O15060 712 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 EFCAB14O75071 495 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 BMP1P13497 986 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 PLA2G16P53816 162 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 POU6F2P78424 691 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 SAMD4BQ5PRF9 694 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 MFSD7Q6UXD7 560 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 UHRF1Q96T88 793 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 LIN7BQ9HAP6 207 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 NRXN2Q9P2S2 1712 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 STX16-NPEPL1H3BU86 382 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 SREBF1P36956 1147 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 DYNLT1P63172 113 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 TFDP3Q5H9I0 405 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 TAF2Q6P1X5 1199 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 CCBE1Q6UXH8 406 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 GLRX5Q86SX6 157 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 LEMD2Q8NC56 503 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 NXNL1Q96CM4 212 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 FAF2Q96CS3 445 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 REXO4Q9GZR2 422 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 AGPAT3Q9NRZ7 376 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 AKAP11Q9UKA4 1901 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 TRPC5OSA6NMA1 111 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 MSH4O15457 936 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 H2AFYO75367 372 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 MED24O75448 989 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 SRP72O76094 671 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 RPL22P35268 128 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 PSEN2P49810 448 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 RBM48Q5RL73 367 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 CES4AQ5XG92 561 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 HDDC2Q7Z4H3 204 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 PHF10Q8WUB8 498 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 TSNARE1Q96NA8 513 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 RIT2Q99578 217 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 TSEN34Q9BSV6 310 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 SLC28A3Q9HAS3 691 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 MAT2BQ9NZL9 334 aa10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 ZNF214Q9UL59 606 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-207ENST00000537408 UGT2B11O75310 529 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 GAD2Q05329 585 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 LYSMD2Q8IV50 215 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 DNAJC5GQ8N7S2 189 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 FAM71DQ8N9W8 422 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 TMEM35BQ8NCS4 154 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 CMASQ8NFW8 434 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 OR2T34Q8NGX1 318 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 OR2T3Q8NH03 318 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 RHOXF1Q8NHV9 184 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 ILKAPQ9H0C8 392 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 HPS4Q9NQG7 708 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 DNMT3LQ9UJW3 386 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 HCN4Q9Y3Q4 1203 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 SNED1Q8TER0 1413 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 MN1Q10571 1320 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 KRT87PA6NCN2 255 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 TSPAN4O14817 238 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 SLC16A4O15374 487 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 ASGR1P07306 291 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 ALOX12P18054 663 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 TAF1P21675 1872 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms